Pairwise Alignments

Query, 326 a.a., catabolite repressor/activator from Vibrio cholerae E7946 ATCC 55056

Subject, 331 a.a., Transcriptional regulator lacI family from Xanthomonas campestris pv. campestris strain 8004

 Score = 97.8 bits (242), Expect = 3e-25
 Identities = 83/312 (26%), Positives = 146/312 (46%), Gaps = 15/312 (4%)

Query: 1   MTLDEIAKLAGVSKTTASYVINGKAQKYRISEKTQHKVMAVVEQYNFRPDHAASALRAGN 60
           ++++++A++AGVSK+T S  +        +SE+ + KV A V Q  +RP+  A  LR+ +
Sbjct: 3   ISINDVARVAGVSKSTVSRALGTGP----VSEEVRAKVEAAVRQTGYRPNLMARRLRSQH 58

Query: 61  SRSFGLIIPDLENTSYARLAKLLEQNSRQAGYQILIACSDDDPQIEMAAAEALVSRRIDA 120
           S   G+I+ D+ N  +  L + +E+ + +AG ++ +  +D+DP+ E    E +   RI  
Sbjct: 59  SGILGVIVADIRNPYFTALIRAVEEVAYKAGMRVTLCNTDEDPEREALYLELMQEERITG 118

Query: 121 L-FVASGIPSASEYYLKLQQSGTPVIAIDRALDDEYFSCVISEDFGAAFELTRSVLTQDV 179
           L F  + +     + L L     P + +DRA     +  V+ ++  A  EL   +  Q  
Sbjct: 119 LIFAPTRVTVGRMHELVLDY---PTVLVDRAGPGSRYDSVVLDNAAAMAELVAHLQAQGY 175

Query: 180 HSV-GLVGALPELNVSREREQGFAMAVKQRGLPTTLGYGEHF-NREEGRKVFAKWVANDQ 237
             + GL G+      + ER  G+  A+  +GL     Y E     E        W+A   
Sbjct: 176 RRIGGLFGSTS--TTAAERRDGYLAAMHAQGLAP--DYREVAPTAEAAIAELEHWLAAAD 231

Query: 238 LPDAVVATSYTLLEGILDVLLEQP-ELMQKVRLATFGDNRLLDFLPIRVNSLPQQFELIA 296
            P+A+V ++  LL G L         L Q + LA F + R  D +   +  + Q  E + 
Sbjct: 232 RPEAIVTSNSLLLMGALKAARTAGLRLPQDLALAGFDNERWTDLVEPGITVVEQPVEDMG 291

Query: 297 DSALALALNASA 308
            +A++L L   A
Sbjct: 292 RAAMSLLLERLA 303