Pairwise Alignments

Query, 326 a.a., catabolite repressor/activator from Vibrio cholerae E7946 ATCC 55056

Subject, 338 a.a., transcriptional regulator, LacI family from Pseudomonas syringae pv. syringae B728a

 Score =  101 bits (252), Expect = 2e-26
 Identities = 77/310 (24%), Positives = 150/310 (48%), Gaps = 8/310 (2%)

Query: 2   TLDEIAKLAGVSKTTASYVINGKAQKYRISEKTQHKVMAVVEQYNFRPDHAASALRAGNS 61
           T+ ++A LAG+S TT S+V+N       +SE  + KV A + Q ++ P   A +L+A  +
Sbjct: 3   TIKDVAALAGISYTTVSHVLNNTRP---VSEPVRLKVEAAIAQLDYVPSAVARSLKAKTT 59

Query: 62  RSFGLIIPDLENTSYARLAKLLEQNSRQAGYQILIACSDDDPQIEMAAAEALVSRRIDAL 121
            + GL+IP+  N  +A LA+ +E    + G+ +++  SDD+P+ +      L+ +R+D L
Sbjct: 60  STIGLLIPNGMNPYFAELARGIEDYCERNGFCVILCNSDDNPEKQRGYLRVLLEKRVDGL 119

Query: 122 FVASGIPSASEYYLKLQQSGTPVIAIDRALDDEYFSCVISEDFGAAFELTRSVLTQDVHS 181
            V+S +   +     L +  TP++ +DR LD      V  +    A+  TR +L     +
Sbjct: 120 IVSS-VGGDAGIAGGLAEVRTPLVIVDRELDGIDADMVRIDHEQGAYLATRHLLDLGHRA 178

Query: 182 VGLVGALPELNVSREREQGFAMAVKQRGLPTTLGYGEH--FNREEGRKVFAKWVANDQLP 239
           +  +G      V+  R  G+  A++Q  +P    +  H  F    G +   + +A    P
Sbjct: 179 IACIGGPFHSTVAEMRLAGYRRALQQASVPVRAEWALHSEFTSSAGHEAACQLLAAHP-P 237

Query: 240 DAVVATSYTLLEGILDVLLEQ-PELMQKVRLATFGDNRLLDFLPIRVNSLPQQFELIADS 298
            A+ A +  +  G+L    E+   + Q + +  F D ++  ++   + ++ Q    + ++
Sbjct: 238 TAIFAGNDVIAIGVLRAAAERLIRVPQDLSVIGFDDIQMSRYVYPALTTVGQSIMQLGET 297

Query: 299 ALALALNASA 308
           A  + L+  A
Sbjct: 298 AAEMLLSRIA 307