Pairwise Alignments

Query, 326 a.a., catabolite repressor/activator from Vibrio cholerae E7946 ATCC 55056

Subject, 331 a.a., transcriptional regulator, LacI family from Pseudomonas syringae pv. syringae B728a

 Score =  296 bits (759), Expect = 4e-85
 Identities = 162/327 (49%), Positives = 220/327 (67%), Gaps = 2/327 (0%)

Query: 1   MTLDEIAKLAGVSKTTASYVINGKAQKYRISEKTQHKVMAVVEQYNFRPDHAASALRAGN 60
           M L +IA+LAGVS TTASYVINGKA+K RIS  T  +V AVVEQ++FRP+  A+ LR+ +
Sbjct: 1   MKLSDIARLAGVSVTTASYVINGKAEKQRISPATVERVKAVVEQHDFRPNPQAAGLRSRH 60

Query: 61  SRSFGLIIPDLENTSYARLAKLLEQNSRQAGYQILIACSDDDPQIEMAAAEALVSRRIDA 120
           S++ G I+PDLEN SYAR+AKLLEQ +R+ GYQ+LIA SDDDP  E+   +   +RR DA
Sbjct: 61  SKTLGFILPDLENPSYARIAKLLEQGARRLGYQLLIASSDDDPASELQLLQLFRARRCDA 120

Query: 121 LFVASGIPSASEYYLKLQQSGTPVIAIDRALDDEYFSCVISEDFGAAFELTRSVLTQDVH 180
           L VAS +P+  + Y +LQ  GTP+IAIDR ++ E+F  V+S+D  A  +LT S+L     
Sbjct: 121 LLVASCLPTGDDSYRELQLKGTPIIAIDREMNPEFFCSVVSDDHDACQQLTHSLLQTRPR 180

Query: 181 SVGLVGALPELNVSREREQGFAMAVKQRGLPTTLGYGEHFNREEGRKVFAKWVAND-QLP 239
            + L+ A PEL++SR R  GF  A+      T + +GE F+R+ G+++  + +     LP
Sbjct: 181 HIALISARPELSISRARAAGFEHALDGFTGATIIEHGEAFSRQCGQRLMTEMLQRQGHLP 240

Query: 240 DAVVATSYTLLEGILDVLLEQPELMQKVRLATFGDNRLLDFLPIRVNSLPQQFELIADSA 299
           DA++ TSY LL+G+ DVL  Q     ++ L TFGD +LLDFLP+ VN++ QQ +LIAD A
Sbjct: 241 DALITTSYVLLQGVFDVLQSQALQSTQLHLGTFGDTQLLDFLPLPVNAMAQQHQLIADKA 300

Query: 300 LALALNASAK-RYQTGIELIPRQLKVR 325
           L LAL A  K  YQ G+  I R  K R
Sbjct: 301 LQLALAAIEKDDYQPGVHAIARAFKQR 327