Pairwise Alignments

Query, 326 a.a., catabolite repressor/activator from Vibrio cholerae E7946 ATCC 55056

Subject, 356 a.a., catabolite repressor protein from Sinorhizobium meliloti 1021

 Score = 87.8 bits (216), Expect = 4e-22
 Identities = 82/304 (26%), Positives = 137/304 (45%), Gaps = 17/304 (5%)

Query: 2   TLDEIAKLAGVSKTTASYVINGKAQKYRISEKTQHKVMAVVEQYNFRPDHAASALRAGNS 61
           T+ +++ L+G S +T S V+NG  +K RI E T   + ++ E + +  +  A  LR+  S
Sbjct: 10  TIYDLSVLSGSSPSTVSAVLNGTWRKRRIKESTAELIRSLAETHQYTANRQARGLRSSRS 69

Query: 62  RSFGLIIPDLENTSYARLAKLLEQNSRQAGYQILIACSDDDPQIEMAAAEALVSRRIDAL 121
              GL++P  +N  ++ LA+  E + R  G   ++  +  DP+ E   AE L+S  ID L
Sbjct: 70  GLVGLLLPVHDNRYFSSLAQTFEAHVRSKGQCPIVVSASRDPEEERRTAETLISYSIDEL 129

Query: 122 FVASGIPSASEYYLKLQQSGTPVIAIDRALDDEYFSCVISEDFGAAFELTRSVLTQ---- 177
           F+  G       +   + +G   I ID  L       VIS++F     LT +++      
Sbjct: 130 FIC-GATDPDGVHEVCEAAGLRHINID--LPGTKVPSVISDNFEGGRLLTEAIIRHFPAE 186

Query: 178 ---DVHSVGLVGALPELNVSREREQGFAMAVKQRGL---PTTLGYGEHFNREEGRKVF-A 230
              +   + L G   + + +RER +GF  AVK   L   P    +   +  +  RK F A
Sbjct: 187 RPLEPDDLYLFGGRDD-HATRERIRGF-RAVKSDLLGADPDECIWPTGYAADNARKAFEA 244

Query: 231 KWVANDQLPDAVVATSYTLLEGILDVLLEQP-ELMQKVRLATFGDNRLLDFLPIRVNSLP 289
            +  + +LP      S    EG+L  + E P E    + +  +  +    FLP  V  + 
Sbjct: 245 FYEQHGKLPRGFFVNSSINFEGLLRFMAEHPLENFTDLVVGCYDYDPFASFLPFPVIMIR 304

Query: 290 QQFE 293
           Q  E
Sbjct: 305 QNIE 308