Pairwise Alignments

Query, 326 a.a., catabolite repressor/activator from Vibrio cholerae E7946 ATCC 55056

Subject, 341 a.a., Transcriptional Regulator, LacI family (NCBI) from Rhodospirillum rubrum S1H

 Score = 82.8 bits (203), Expect = 1e-20
 Identities = 79/330 (23%), Positives = 148/330 (44%), Gaps = 22/330 (6%)

Query: 1   MTLDEIAKLAGVSKTTASYVINGKAQKYRISEKTQHKVMAVVEQYNFRPDHAASALRAGN 60
           +++ ++A+ AGVS +T S  +     +  ISE  + +V A V +  +RP+ +A  LR+  
Sbjct: 11  VSIKDVARHAGVSPSTVSRALG----RGPISEPLRQQVEAAVRETGYRPNLSARRLRSRE 66

Query: 61  SRSFGLIIPDLENTSYARLAKLLEQNSRQAGYQILIACSDDDPQIEMAAAEALVSRRIDA 120
           S + GLI+ D+ N  +  L + +E  + QAG ++++  + +D + E      +   R+  
Sbjct: 67  SGTVGLILADIGNPFFTALTRAVEDAAYQAGLRVILCNTGEDAEREAMYLRLMQEERVSG 126

Query: 121 LFVASGIPSASEYYLKLQQS--GTPVIAIDRALDDEYFSCVISEDFGAAFELTRSVLTQD 178
           +  A  +     Y     QS    PV+ +DRA     +  V+ ++  A   L      + 
Sbjct: 127 VIFAPTL----AYLDHPPQSPLDFPVVLVDRAGPQGLYDSVVLDNEAACATLVDHFHARG 182

Query: 179 VHSV-GLVGALPELNVSREREQGFAMAVKQRGL-PTTLGYGEHFNREEGRKVFAKWVAND 236
              + GL G      V  ER +G+   ++  GL P       H   E      ++W++  
Sbjct: 183 YRRINGLFGKTSATGV--ERRRGYDDTMRAYGLEPKACAIAPH--AEAAEVAVSRWLSEP 238

Query: 237 QLPDAVVATSYTLLEGILDVLLEQ-PELMQKVRLATFGDNRLLDFLPIRVNSLPQQFELI 295
           + P+A+VA++  LL G L  +      L   + LA F +    + +   +  + Q  E I
Sbjct: 239 EPPEAIVASNSLLLIGALRAVRRAWLRLPDDIALAGFDNELWTELVEPGMTVIEQPIEAI 298

Query: 296 ADSALALALNASAKRYQTGIELIPRQLKVR 325
             +A++L  +  A        L PRQ+ ++
Sbjct: 299 GRAAMSLLRDRMADP-----TLPPRQIVLK 323