Pairwise Alignments

Query, 326 a.a., catabolite repressor/activator from Vibrio cholerae E7946 ATCC 55056

Subject, 351 a.a., LacI family DNA-binding transcriptional regulator from Rahnella sp. WP5

 Score =  159 bits (402), Expect = 1e-43
 Identities = 92/294 (31%), Positives = 166/294 (56%), Gaps = 7/294 (2%)

Query: 1   MTLDEIAKLAGVSKTTASYVINGKAQKYRISEKTQHKVMAVVEQYNFRPDHAASALRAGN 60
           +T+  IA+LAGVSK+TAS V+NG ++K+RIS+ T+ +V+AV  +++++P   A +L    
Sbjct: 17  ITISGIAELAGVSKSTASQVLNGHSKKFRISDPTRDRVLAVAAEHHYQPSIHARSLNVSR 76

Query: 61  SRSFGLIIPDLENTSYARLAKLLEQNSRQAGYQILIACSDDDPQIEMAAAEALVSRRIDA 120
           S + GL++P++ N  +A  +  LE   R+ G Q+LIAC+D++   E      L+ R++D 
Sbjct: 77  SFTLGLVVPEMTNYGFAACSNELETLCRENGMQLLIACTDENTSQETMVVNNLIQRQVDG 136

Query: 121 LFVASGIPSASEYYLKLQQSGTPVIAIDRALDDEYFSCVISEDFGAAFELTRSVLTQDVH 180
           L VAS + S +EY    QQ   PV+  DR + D     V+ E   ++ EL   +      
Sbjct: 137 LIVASSMLSDAEYVKISQQ--VPVVLFDRHMQDTQLPIVVCEAIESSAELVSRIAKIQRD 194

Query: 181 SVGLVGALPELNVSREREQGFAMAVKQRGL---PTTLGYGEHFNREEGRKVFAKWVAN-D 236
               +G  P ++ +R+R  G+ + +++ G+   P  + YG +++   G ++FA+  A   
Sbjct: 195 EFYFIGGQPRISPTRDRLAGYQLGLQREGVSLDPDWIVYG-NYHPSSGYEMFAQLCARLG 253

Query: 237 QLPDAVVATSYTLLEGILDVLLEQPELMQKVRLATFGDNRLLDFLPIRVNSLPQ 290
           + P A+   S  L+EG+L  + +   L   + L +F D+ L D L ++++++ Q
Sbjct: 254 RPPKALFVASCGLMEGVLRYMSQHQLLESDIHLCSFDDHYLYDSLSVKIDTVAQ 307