Pairwise Alignments

Query, 400 a.a., bifunctional PTS fructose transporter subunit IIA/HPr protein from Vibrio cholerae E7946 ATCC 55056

Subject, 960 a.a., fructose-specific PTS system (fructose 1-phosphate forming), EI, Hpr, and EII-A components (from data) from Pseudomonas stutzeri RCH2

 Score =  256 bits (653), Expect = 3e-72
 Identities = 156/399 (39%), Positives = 219/399 (54%), Gaps = 28/399 (7%)

Query: 1   MLELTTQDIQLQQHFANKQAAIQGLAHALTAKGLVAEGYAQGMLNREAQHSTYLGNGIAI 60
           MLEL  Q I + Q  A+K AA+  L   L A GLVA GY +G+  REAQ ST+LG GIAI
Sbjct: 1   MLELNAQHIHMHQAAADKPAALALLGEVLVADGLVAAGYLEGLRAREAQGSTFLGQGIAI 60

Query: 61  PHGTTDTRELVKQTGVTAMHFPQGLDWGDGNLVYVAIGIAAKSDEHLGILKQLTRVLSAD 120
           PHGT +TR+ V  TGV  +HFP G+DWG+G LVY+AIGIAA+SDEHL +L+ LTR L   
Sbjct: 61  PHGTPETRDQVFTTGVRLLHFPAGVDWGNGQLVYLAIGIAARSDEHLRLLQLLTRALGEG 120

Query: 121 GVEQALQQAKTAQQIIAIIKGEAQLTADFDASLIQLQFPASDMVQMSAVAGGLLKNTGCA 180
            + + LQQA++ + II +++G  Q  A  D  L+ L   A D  +++     LLK   C 
Sbjct: 121 DLSEGLQQAESPEAIIGLLQGAPQALA-LDGELVSLGVAADDFDELAWQGVKLLKRAQCV 179

Query: 181 ENEFVADLVTKAPTHLGRGLWLVASDRAVKRTGMSIVTTANHCEYEQQAVKALIAFSVCN 240
           E  F A L       LG GLW ++S+++V+R G++ VT  ++ E++ Q +  L   +   
Sbjct: 180 EPGFNASLPLGQSLPLGDGLWWLSSEQSVQRPGLAFVTPVSNLEHQGQPLNGLFVLASMG 239

Query: 241 DVHQPLLNTITQCVFEQKQDQLLQADVQQLLNLFSGNAEQTIAQRTIAVGTITEETIAAE 300
           + HQ +L  +   + E +  +L QA                 + RT+       E +  +
Sbjct: 240 EAHQAMLERLCNLLIEGRGQELSQA----------------TSSRTVL------EALGGD 277

Query: 301 TVAEPDSARAHTATFRIKNSHGLHARPGAMLVAEAKKFESNIRVSNLDGDGQVVNAKSLM 360
             A+  SA+   A     N+HGLHARP  +L   A+ FE  IRV     +   V+ KSL 
Sbjct: 278 VPADWPSAQVPLA-----NAHGLHARPAKVLTEIAQAFEGEIRVRLAGTESAGVSVKSLS 332

Query: 361 KVIALGVKHNHQLQFTAEGPDAEAALQALGVAINAGLGE 399
           K++A+G      L+F AE   A  AL AL  A+  GLGE
Sbjct: 333 KLLAMGAHRGQLLEFMAEPAIASDALPALVRAVEEGLGE 371