Pairwise Alignments

Query, 400 a.a., bifunctional PTS fructose transporter subunit IIA/HPr protein from Vibrio cholerae E7946 ATCC 55056

Subject, 956 a.a., fused PTS fructose transporter subunit IIA/HPr protein from Pseudomonas aeruginosa PA14

 Score =  271 bits (693), Expect = 6e-77
 Identities = 168/399 (42%), Positives = 226/399 (56%), Gaps = 28/399 (7%)

Query: 1   MLELTTQDIQLQQHFANKQAAIQGLAHALTAKGLVAEGYAQGMLNREAQHSTYLGNGIAI 60
           MLEL T+ I++ Q  A+K  A++ L  AL A GL A GYA+G+  REAQ STYLG GIAI
Sbjct: 1   MLELDTRQIRMGQRAADKAEALRLLGAALVADGLAAPGYAEGLKAREAQGSTYLGQGIAI 60

Query: 61  PHGTTDTRELVKQTGVTAMHFPQGLDWGDGNLVYVAIGIAAKSDEHLGILKQLTRVLSAD 120
           PHGT DTRELV  TGV  + FP+G+DWGDG  VY+AIGIAAKSDEHL +L+ LTR L   
Sbjct: 61  PHGTPDTRELVFSTGVRLLQFPEGVDWGDGQQVYLAIGIAAKSDEHLQLLQLLTRALGEA 120

Query: 121 GVEQALQQAKTAQQIIAIIKGEAQLTADFDASLIQLQFPASDMVQMSAVAGGLLKNTGCA 180
            +  AL  A +A++++ +++G  Q  A  DA L+ L   A D+ +++ +   LLK  GC 
Sbjct: 121 DLGPALSAAASAEEVLGLLQGAPQELA-LDAQLVGLGQNAEDLDELAWLGARLLKKAGCV 179

Query: 181 ENEFVADLVTKAPTHLGRGLWLVASDRAVKRTGMSIVTTANHCEYEQQAVKALIAFSVCN 240
           EN F A L    P  LG GL  + S++ VKR G++ VT A   +++ Q V  L   +   
Sbjct: 180 ENGFAAVLQQTEPLPLGDGLCWLHSEQLVKRPGLAFVTPAQPLQHQGQPVTGLFCLASLG 239

Query: 241 DVHQPLLNTITQCVFEQKQDQLLQADVQQLLNLFSGNAEQTIAQRTIAVGTITEETIAAE 300
           + HQ LL  +   + E +  +L++A               T ++  +A        +  E
Sbjct: 240 EAHQALLERLCDLLLEGRGAELVRA---------------TSSRSVLA-------ALGGE 277

Query: 301 TVAEPDSARAHTATFRIKNSHGLHARPGAMLVAEAKKFESNIRVSNLDGDGQVVNAKSLM 360
              +  SARA  A     N HGLHARP   L   AK F   IRV   D +   V+AKSL 
Sbjct: 278 LPPDWPSARAVLA-----NPHGLHARPAQALAQLAKGFAGEIRVRLADSEAAPVSAKSLS 332

Query: 361 KVIALGVKHNHQLQFTAEGPDAEAALQALGVAINAGLGE 399
           K++ALG +    L+F+AE   AE AL AL  A+  GLGE
Sbjct: 333 KLLALGARRGQTLEFSAEPAIAEDALPALLAAVREGLGE 371