Pairwise Alignments

Query, 227 a.a., ATP-dependent zinc protease from Vibrio cholerae E7946 ATCC 55056

Subject, 289 a.a., hypothetical protein (RefSeq) from Shewanella amazonensis SB2B

 Score = 47.8 bits (112), Expect = 2e-10
 Identities = 42/138 (30%), Positives = 62/138 (44%), Gaps = 13/138 (9%)

Query: 86  KIVLGDKEWVYLPGLKESFKARIDTGATTSSISAVDIVPFERGGQ---------DWVKFR 136
           K  +G    ++ P    SF AR+DTGA+ SSI AVDI     GG+           VKF 
Sbjct: 20  KSTVGQSVEIHQPASGLSFIARVDTGASISSIHAVDIEVL--GGEAESMKDNIGKRVKFT 77

Query: 137 IEHDNIRSEELSLPVERWVRIRQSSAEEAQRRAVVVAWIQIGDLKEQTEFTLTDRTHLTY 196
            E     ++ +   + +   +  S   E+  R  V   +Q           L DR H+ Y
Sbjct: 78  TEGLGGVTKAIEAKIVKVTTVSNSQGTES--RYTVELELQYEKDVRNIRVNLRDRGHMDY 135

Query: 197 PLLLGRSFFKDVAVVDVS 214
            LLLGR++ +   +VDV+
Sbjct: 136 KLLLGRNWLEGHYMVDVA 153



 Score = 42.7 bits (99), Expect = 7e-09
 Identities = 35/137 (25%), Positives = 62/137 (45%), Gaps = 9/137 (6%)

Query: 86  KIVLGDKEWVYLPGLKESFKARIDTGATTSSISAVDIVPFERGGQDW-------VKFRIE 138
           K V+G++  ++L     +F  RIDTGA  +S+ A DI        D        + F   
Sbjct: 155 KNVIGERAPIHLLEGDITFDTRIDTGAVENSLHATDIQIENEHPSDMEANVGKPISFTTV 214

Query: 139 HDNIRSEELSLPVERWVRIRQSSAEEAQRRAVVVAWIQIGDLKEQTEFTLTDRTHLTYPL 198
           ++      +   +     IR +   E   R +V   +     + + +  L DR+ +T+ L
Sbjct: 215 NEKGEKRRIHSRITETSLIRNAQGSEV--RYMVELTLGEPGKEFKVKVNLRDRSEMTHKL 272

Query: 199 LLGRSFFKDVAVVDVSR 215
           L+GR++ +   +VDVSR
Sbjct: 273 LIGRNWLQGHYIVDVSR 289