Pairwise Alignments

Query, 227 a.a., ATP-dependent zinc protease from Vibrio cholerae E7946 ATCC 55056

Subject, 308 a.a., hypothetical protein (RefSeq) from Shewanella loihica PV-4

 Score = 47.8 bits (112), Expect = 2e-10
 Identities = 38/145 (26%), Positives = 64/145 (44%), Gaps = 7/145 (4%)

Query: 76  FSTATKTSDGKIVLGDKEWVYLPGLKESFKARIDTGATTSSISAVDIVPFERGGQDWVKF 135
           F  A    D K V+G    + +      ++ARIDTGA  +S+ A D+   + G    +  
Sbjct: 30  FLLAPAYGDDKAVIGQTAMMTVDEAGLVYQARIDTGAGNTSLHAFDL-EIQGGSAKKMAD 88

Query: 136 RIEH------DNIRSEELSLPVERWVRIRQSSAEEAQRRAVVVAWIQIGDLKEQTEFTLT 189
            +        +N+  E   L  +       S+++  + R +V   +       + +  L 
Sbjct: 89  NVGKTIWFTTENVAGERKRLSAKIVKTSTVSNSQGTETRYMVEMHVGFAGETRKVKVNLR 148

Query: 190 DRTHLTYPLLLGRSFFKDVAVVDVS 214
           DR H+ Y LL+GR++ K   VVDVS
Sbjct: 149 DRGHMDYKLLIGRNWLKGKYVVDVS 173



 Score = 41.2 bits (95), Expect = 2e-08
 Identities = 32/121 (26%), Positives = 60/121 (49%), Gaps = 14/121 (11%)

Query: 104 FKARIDTGATTSSISAVDIVPFERGGQDW-------VKFRIEHDNIRSEELSLPVERWVR 156
           F  RIDTGA  +S+ AVD+   E G +D        + F  E++   ++ +   +     
Sbjct: 193 FDTRIDTGAVENSLHAVDL-KVENGVEDMEQNVGKMLAFTTENEKGETKRVHARIVETSL 251

Query: 157 IRQSSAEEAQRRAVVVAWIQIGD--LKEQTEFTLTDRTHLTYPLLLGRSFFKDVAVVDVS 214
           IR +   E +     +  + +G+   + + +  L DRT +T  LL+GR++ +   +VDV+
Sbjct: 252 IRNAQGSEVR----YMVELNVGEPGREYKVKVNLRDRTKMTNKLLIGRNWLQGHYLVDVA 307

Query: 215 R 215
           +
Sbjct: 308 K 308