Pairwise Alignments

Query, 706 a.a., anaerobic ribonucleoside-triphosphate reductase from Vibrio cholerae E7946 ATCC 55056

Subject, 673 a.a., ATP-cone (NCBI) from Rhodospirillum rubrum S1H

 Score =  138 bits (348), Expect = 8e-37
 Identities = 172/695 (24%), Positives = 289/695 (41%), Gaps = 78/695 (11%)

Query: 3   PIVIKRDGSKAPFNRDRIQAAVESAAEHADQEIAIYALNVAL-AVELKLRDY--DEVHIT 59
           P V+KR G   PF+  +I++A+E A +       I A  +A+ AV++    +  D  HI 
Sbjct: 10  PGVVKRSGRTVPFDAVKIRSAIERAGKATGDFDPIEAQLLAIQAVKVLSHRFTEDAPHIE 69

Query: 60  EIQTLVENELMQGPYKALARSYIEYRHDRDVAREKQSKLTKEIEGLIQE--SNADL-LNE 116
           +IQ +VE  L+   + A AR+YI YR      R  + K   ++E  I E    AD  +N 
Sbjct: 70  QIQDVVEQVLISANHFATARAYIVYREQHARLRIDR-KTVVDVESSINEYLDRADWRVNA 128

Query: 117 NANKD---GKVIPTQRDLLAGIVAKHYAKTRILPRDVVQAHESGDIHYHDLDYAPFFPMF 173
           NAN+    G +I      ++G V  +Y  + + P ++  AH  GD+H HDLD    +   
Sbjct: 129 NANQGYSLGGLILN----VSGKVVANYWLSHVYPPEIGNAHRQGDLHIHDLDMLAGY--- 181

Query: 174 NCMLIDLKGMLTHGFK--MGNAEIDTPKSISTATAVTAQIIAQVASHIYGGTTINRIDEV 231
            C    L+ +LT G     G  E   PK +S+A       +  + +   G    +  D  
Sbjct: 182 -CAGWSLRTLLTEGLNGVPGKVEAGPPKHLSSAVGQIVNFLGTLQNEWAGAQAFSSFDTY 240

Query: 232 LAPYVTASYEKHLEIAR-----EWDIHSPEAFAKARTEKECYDAFQSLEYEVNTLHTANG 286
           LAP+V A    + E+ +      ++++ P  +            F +L ++         
Sbjct: 241 LAPFVRADRLSYAEVRQFIQELVYNLNVPSRWGTQTP-------FTNLTFDWTCPEDLRD 293

Query: 287 QTPF-----VTFGFGLGTSWESRLIQQSILKNRIAGLGKNRKTAVFPKLVFAIKDGLNHK 341
           Q P      V F +G     E  LI ++ ++    G  K R        VF       + 
Sbjct: 294 QVPVIGGVEVDFTYG-DLQVEMDLINRAYMEVMTEGDAKGR--------VFTFPIPTYNI 344

Query: 342 TEDPNYDIKQL--ALECASKRMYPDILNYDKVVEVTGSFKTPMGCRSFLNPYE--ENGEL 397
           T+D  +D +      E  +K   P   N+    E+  S    M CR  L+  E  + G  
Sbjct: 345 TKDFPWDSENADRLFEMTAKYGLPYFQNFVNS-ELNPSMIRSMCCRLQLDLTELLKRGNG 403

Query: 398 IH---EGRNNLGVVSLNLPRIALQAKGDINKFYALLDDKLKLARRALDTRINRLENVKAR 454
           +    E   +LGVV+LN  R+    +GD    +A LD  L L R +L+        +K +
Sbjct: 404 LFGSAEQTGSLGVVTLNCARLGYIHQGDEAGLFARLDTLLDLGRNSLE--------IKRK 455

Query: 455 VAPILYMEGACGVRLKANDSIADIFKHGRASISLGYIGVHETIMALFGQQKHVYDDVQLR 514
           V       G      +   ++ + F       +LG  G++E I       + +       
Sbjct: 456 VIQRHMDHGLFPYTKRYLGTLRNHFS------TLGVNGINEMIRNFTAGAEDITTPYG-H 508

Query: 515 EEAVKIIQHLRNAVEQWKKETGYAFSLYGTPSENLCSRFCRIDAKQFGVV--EGVTDKGY 572
             AV+ + H+R  +  +++ETG+ ++L  TP+E    RF R D K+F  +   G  D+ Y
Sbjct: 509 ALAVRFLDHVRARIVGFQEETGHLYNLEATPAEGTTYRFAREDQKRFPDILQAGTPDQPY 568

Query: 573 YTNSFHLDVQKKVNPYDKIDFEMPYPEISSGGFICYGEFPNMQRNVEALENVWDYSYH-- 630
           YTNS  L V    +P++ ++ +       +GG + +    +   + EA + +   +    
Sbjct: 569 YTNSSQLPVGFTDDPFEALERQEELQAKYTGGTVVHLYMGSRVSSAEACKRLVRRALERF 628

Query: 631 RVPYYGTNTPIDECYECGFTGEFDCTSKGFVCPRC 665
           R+PY         C   G+        +   CP+C
Sbjct: 629 RLPYITVTPTFSICPTHGY-----IEGEHAFCPKC 658