Pairwise Alignments

Query, 706 a.a., anaerobic ribonucleoside-triphosphate reductase from Vibrio cholerae E7946 ATCC 55056

Subject, 689 a.a., anaerobic ribonucleoside-triphosphate reductase, putative (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score =  143 bits (361), Expect = 2e-38
 Identities = 174/751 (23%), Positives = 294/751 (39%), Gaps = 127/751 (16%)

Query: 5   VIKRDGSKAPFNRDRIQAAVESAAEHADQEIAIYALNVALAVELKLRDYDEVHITEIQTL 64
           ++KRDG    ++ DR+  A+  A + +  +  +    +A  VE KL D D      +Q +
Sbjct: 5   ILKRDGRVETWSVDRVAHAINKALKASGIKDPLLGKRLASRVEAKLEDVDAPEQEHVQDM 64

Query: 65  VENELMQGPYKALARSYIEYRHDRDVAREKQSK---LTKEIEGLIQESNADLLNENANK- 120
           V+  LM+    A+A  YI YR  R   R +      + + IE  +  S+  + NEN+N  
Sbjct: 65  VQRVLMEARLYAVAERYIIYREKRREMRNQNQAYLDIARMIESYLDRSDWRV-NENSNMG 123

Query: 121 ---DGKVIPTQRDLLAGIVAKHYAKTRILPRDVVQAHESGDIHYHDLDYAPFFPMFNCML 177
               G ++     + A  V + Y      P +V  AH  G  H HDL +        C  
Sbjct: 124 HSYQGLILHMAGSVQARYVLEKY------PEEVRLAHTHGYFHIHDLSFGL---AGYCAG 174

Query: 178 IDLKGMLTHGFKMGNAEIDTPKS-ISTATAVTAQIIAQVASHIYGGTTINRIDEVLAPYV 236
             L+ +L  GF +       P +    A       +  + +   G    N +D  LAP+V
Sbjct: 175 WSLRDLLLEGFNLKGRCCAAPANHFDAACGQIVNFLGTLQNEWAGAQAFNNVDTYLAPFV 234

Query: 237 TASYEKHLEIAREWDIHSPEAFAKARTEKECYDAFQSLEYEVNTLHTANGQTPFVTFGFG 296
                +H                   T  E     Q L Y +NT     GQ+PF  F F 
Sbjct: 235 -----RH----------------DGLTYDEVKQTMQKLVYNLNTTSRWGGQSPFTNFTFD 273

Query: 297 LGT-----------------------SWESRLIQQSILKNRIAGLGKNRKTAVFPKLVFA 333
           L                           E  +I ++ ++  + G    R        +F+
Sbjct: 274 LAPPKHIANEPVIIGGEFKDSTYGEYGVEMEMINRAFIEVMLEGDADKR--------IFS 325

Query: 334 IKDGLNHKTEDPNYDIK--QLALECASKRMYPDILNYDKVVEVTGSFKTPMGCRSFLNPY 391
                 + T D  +D +  +L L+  ++   P   N+    ++       M CR  ++  
Sbjct: 326 FPIPTYNVTPDFPWDSEAGRLLLKLTARYGVPYFQNFINS-DLNPEDVRSMCCRLQMDLR 384

Query: 392 E---ENGELIHEG--RNNLGVVSLNLPRIALQAKGDINKFYALLDDKLKLARRALDTRIN 446
           E     G L   G    ++GVV+LNLP++A  A+G+   F  ++ +  ++AR AL+    
Sbjct: 385 EIRKRTGGLFGSGDLTGSIGVVTLNLPKLAYLAQGE-EDFLDMVTEYAEMARDALE---- 439

Query: 447 RLENVKARVAPILYMEGACGVRLKANDSIADIFKHGRASISLGY---------IGVHETI 497
                        Y    C   L+A      +F   R  +  GY         IG HE  
Sbjct: 440 -------------YKRKLCTKLLEAG-----MFPFSRRYLKNGYNGHFSTIGLIGGHEAC 481

Query: 498 MALFGQQKHVYDDVQLREEAVKIIQHLRNAVEQWKKETGYAFSLYGTPSENLCSRFCRID 557
           + L G  K +  +  LR    + + HLR+   ++++ETG+ ++L  TP E  C R  ++D
Sbjct: 482 LNLLG--KGIESEAGLRLMK-RTLNHLRDLTVRFQEETGHMYNLEATPGEGTCYRLAKVD 538

Query: 558 AKQF-GVVEGVTDKGYYTNSFHLDVQKKVNPYDKIDFEMPYPEISSGGFICYGEFPNMQR 616
            + +  +     D  YYTNS  L V    + +  ++ +     + +GG + +        
Sbjct: 539 RELYEDIAVSGGDVPYYTNSTLLPVGITDDVFSALEHQNELQTLYNGGTVFHSFLGEAAP 598

Query: 617 NVEALEN--VWDYSYHRVPYYGTNTPIDECYECGFTGEFDCTSKGFVCPRCGNHEPTKVS 674
           + +++ N  +   S  R+PY         C   G+        + F CP+CG+    +  
Sbjct: 599 DEDSVRNYLMKAMSKTRIPYISVTPTFSICQNHGY-----LHGEHFNCPQCGD----EAE 649

Query: 675 VTRRVCGYLGSPDARPFNVGKQEEVKRRVKH 705
           V  RV GY        +N+GKQ+E K R ++
Sbjct: 650 VYTRVVGYY--RPVNRWNLGKQQEYKERKEY 678