Pairwise Alignments

Query, 230 a.a., site-specific DNA-methyltransferase from Vibrio cholerae E7946 ATCC 55056

Subject, 367 a.a., modification methylase BabI from Phaeobacter inhibens DSM 17395

 Score = 65.5 bits (158), Expect = 1e-15
 Identities = 57/248 (22%), Positives = 102/248 (41%), Gaps = 36/248 (14%)

Query: 14  MSKIYQMDAVDWLKTLENCSVDLFITDPPYESLEKYRQIGTTTRLKESKSSS-----NQW 68
           ++ I   D ++ +  L + SVDL   DPPY    K    G   R   SK  +     +Q+
Sbjct: 14  LNAILDGDCIEVMSGLPSNSVDLIFADPPYNLQLK----GQLHRPDNSKVDAVDDHWDQF 69

Query: 69  FSVFPNTRF-EELFREVYRVLKKGSHFYLFCDQETMFLAKPIAESVGFKFWKPIVWDK-- 125
            S     +F  +  ++  R+LK     ++      +F      +  GF     ++W K  
Sbjct: 70  SSFGVYDKFTRDWLKQARRILKPNGSIWVIGSYHNIFRVGTAVQDEGFWILNDVIWRKSN 129

Query: 126 -------------------CAIGMGYHYRARYEFILFFEKGKRKLNDLSVPDVLEYKRVW 166
                               +   G  Y   YE +    +G +  +D  +P    ++R+ 
Sbjct: 130 PMPNFRGKRYTNAHETMIWASKSEGAKYTFNYEALKALNEGLQMRSDWVMPICTGHERLK 189

Query: 167 -----KGYPTEKPVELLEVLIRQSSSENEIVADSFFGSGSTLIAANNLSRKYIGCDISSS 221
                K +PT+KP  LL  ++  S++  ++V D FFG+G+T   A  L R++IG +  ++
Sbjct: 190 DDAGNKAHPTQKPEALLHRILVGSTNPGDVVLDPFFGTGTTGAVAKMLGREFIGIEREAA 249

Query: 222 AHEYFKNR 229
             E  + R
Sbjct: 250 YREVAEKR 257