Pairwise Alignments

Query, 230 a.a., site-specific DNA-methyltransferase from Vibrio cholerae E7946 ATCC 55056

Subject, 382 a.a., DNA modification methylase from Sphingomonas koreensis DSMZ 15582

 Score = 58.9 bits (141), Expect = 1e-13
 Identities = 52/236 (22%), Positives = 94/236 (39%), Gaps = 37/236 (15%)

Query: 14  MSKIYQMDAVDWLKTLENCSVDLFITDPPYESLEKYRQIGTTTRLKESK---SSSNQWFS 70
           +  I Q D ++ ++ +   S+D+   DPPY       Q+G      +     + +++W  
Sbjct: 29  LDTIIQQDCIEAMRAMPAASIDMIFADPPYNL-----QLGGDLNRPDGSFVDAVTDEWDK 83

Query: 71  VFPNTRFEELFR----EVYRVLKKGSHFYLFCDQETMFLAKPIAESVGFKFWKPIVWDKC 126
                 ++   R    E  R+LK     ++      +F      + +GF     I+W K 
Sbjct: 84  FDSLNAYDAFTRAWLAEARRILKPNGTIWVIGSYHNIFKVGSAIQDLGFWILNDIIWRKA 143

Query: 127 ---AIGMGYHYRARYEFILFF---EKGKRKLNDLSVP---DVLEYKRVW----------- 166
                  G  +   +E +++    EK K   N  S+    D L+ +  W           
Sbjct: 144 NPMPNFKGTRFTNAHETLIWASMGEKAKYTFNYRSMKTLNDELQMRSDWEFPICGGQERL 203

Query: 167 -----KGYPTEKPVELLEVLIRQSSSENEIVADSFFGSGSTLIAANNLSRKYIGCD 217
                K +PT+KP  LL  ++   +   +++ D FFG+G+T   A  L R +IG D
Sbjct: 204 KKNGVKVHPTQKPEALLYRVMLACTKPGDVILDPFFGTGTTGAVAKRLRRHWIGID 259