Pairwise Alignments

Query, 208 a.a., LysE family translocator from Vibrio cholerae E7946 ATCC 55056

Subject, 212 a.a., L-lysine permease from Pseudomonas fluorescens FW300-N2E2

 Score =  110 bits (274), Expect = 2e-29
 Identities = 71/206 (34%), Positives = 110/206 (53%), Gaps = 14/206 (6%)

Query: 3   LNSLLLFIVACLAINMIPGPDVIYIVSNTMKGKLVTGFKAAMGLGVGYFVHTLAASLGLS 62
           L  LL+F  A L + + PGP++IY++S ++      G  + +G+  G+FVH  AA+ GL+
Sbjct: 4   LPDLLIFAAAALLMVLTPGPNMIYLISRSICQGRKAGVTSLLGVVAGFFVHMFAAAAGLT 63

Query: 63  AIILSSAVAFSAVKWLGAAYLVYLGVQSLLSMWRGGSTLKVSE-SVESDKNVFVQGVIVS 121
           A+ L+  +A+  +KW GA YL++L  Q++    R  S  +  +   +S + +   G   S
Sbjct: 64  AVFLAVPMAYEVLKWAGALYLLWLAWQAVKPGAR--SPFEAQQLPADSTRKLITMGFFTS 121

Query: 122 VLNPKVALFFLSFLPQFIDTSSGSASMQLLWLGLL-----FSVLVTMCNILYASVGSWVF 176
            LNPK+A+F+LS  PQFI    GS   Q + LGL      FSV + +  +  A + SW  
Sbjct: 122 ALNPKIAVFYLSVFPQFISPEHGSLFTQSIILGLTQISVSFSVNLLIA-LFAAGIASWFV 180

Query: 177 SRPN---SQRYSRGLEGVSGVLLIGL 199
             P    +QRY  G   V G L + L
Sbjct: 181 HNPTWLAAQRYFMGF--VLGALALRL 204