Pairwise Alignments

Query, 208 a.a., LysE family translocator from Vibrio cholerae E7946 ATCC 55056

Subject, 209 a.a., Transmembrane amino acid efflux protein from Pseudomonas fluorescens FW300-N2E2

 Score =  109 bits (272), Expect = 4e-29
 Identities = 66/209 (31%), Positives = 118/209 (56%), Gaps = 6/209 (2%)

Query: 2   DLNSLLLFIVACLAINMIPGPDVIYIVSNTMKGKLVTGFKAAMGLGVGYFVHTLAASLGL 61
           D  +L LF+VA + + ++PGP++ ++ S+ +      G  AA+G+     + T+  S G+
Sbjct: 3   DTANLYLFVVAVVLLLIVPGPNMAFVTSHALAHGWRAGIAAALGISFSDVLMTMMVSAGI 62

Query: 62  SAIILSSAVAFSAVKWLGAAYLVYLGVQSLLSMWRGGSTLKVSESVESDKNVFVQGVIVS 121
            A+++S A AF  ++  GA YL++L  Q+L +     +T      V S   +F +G + S
Sbjct: 63  GALVMSWAPAFDILRLAGAGYLLWLAWQALRT---PAATQDSQLQVASLWRIFCRGALNS 119

Query: 122 VLNPKVALFFLSFLPQFIDTSSGSASMQLLWLGLLFSVLVTMCNILYASVGSWVFSRPNS 181
           +LNPK  LFF+ FLPQF++  +G  S+QL++LG L +++  + + L     + + ++  S
Sbjct: 120 LLNPKALLFFMVFLPQFVNVKAGGVSVQLIFLGALLALIALVFHTLLGVCAAQLRAKLAS 179

Query: 182 QRYSR--GLEGVSGVLLIGLASKVAISDR 208
              SR  G  G +GV +  LA+++   DR
Sbjct: 180 GGISRRLGTYGFAGV-MAALAARLLFLDR 207