Pairwise Alignments

Query, 119 a.a., VOC family protein from Vibrio cholerae E7946 ATCC 55056

Subject, 260 a.a., antigen, putative (NCBI ptt file) from Shewanella oneidensis MR-1

 Score = 40.4 bits (93), Expect = 2e-08
 Identities = 29/115 (25%), Positives = 53/115 (46%), Gaps = 5/115 (4%)

Query: 5   GKLNYVEFAAKDLESTKAFFSKVFGWSFVDYG---PEYAAFSNEGLD-GGFFKAELSSRT 60
           G+  +VE A+ D    +AF+  +FGW+ V+       ++ F+ +G D G  ++   S   
Sbjct: 9   GQACWVELASHDWLGAQAFYHALFGWNTVEMPIPMGHFSLFNLQGDDLGAMYQIPQSESQ 68

Query: 61  ENGGALLIFYSSDIEATLEKVVKNGGHI-IRPIFEFPGGCRFHFTEPSGNEFAVW 114
                 + F   DI+A++  ++  GG + I P      G     ++  G  FA+W
Sbjct: 69  TPSHWRIYFAVKDIDASIAAILAAGGQLHIGPHVVGDAGVMAQVSDIEGARFALW 123



 Score = 29.6 bits (65), Expect = 3e-05
 Identities = 27/116 (23%), Positives = 46/116 (39%), Gaps = 5/116 (4%)

Query: 3   QHGKLNYVEFAAKDLESTKAFFSKVFGWSFVDY---GPEYAAFSNEGLDGGFFKAELSSR 59
           +   L +VE A ++      F++KVF W+ V     G +Y  +  EG   G     +S  
Sbjct: 136 EENTLCWVELACREPSHEADFYTKVFPWTSVSSHVPGIDYTEWQTEGQSIGGMMQIMSEW 195

Query: 60  TENGGALLIFYS-SDIEATLEKVVKNGGHIIRPIFEFPGGCRFH-FTEPSGNEFAV 113
            E     + ++  +D +    K    G  +  P  + P   RF    +  G  FA+
Sbjct: 196 GEVAAHWMPYFRVADCDDIAAKAQALGAQLCVPPSDIPNVGRFAVIADAQGATFAI 251