Pairwise Alignments

Query, 642 a.a., threonine--tRNA ligase from Vibrio cholerae E7946 ATCC 55056

Subject, 387 a.a., Anticodon-binding (NCBI) from Rhodospirillum rubrum S1H

 Score =  100 bits (248), Expect = 2e-25
 Identities = 96/367 (26%), Positives = 149/367 (40%), Gaps = 54/367 (14%)

Query: 243 RDHRKIGKQLDLFHMQQEAPGMVFWHHNGWSIFRDLEIFIRQKLNEYGYQEVKGPLMMDR 302
           RD   +G+  +LF  +    G  +W   G ++ R +E  +R  L   GY E++ P ++D 
Sbjct: 22  RDPVALGESQELFLWRATGGGNPYWLPRGLTLLRVIEGGLRAWLEAAGYAEIRTPPLVDG 81

Query: 303 VLWERSGHWDKYADAMFTTSSENREYAIKPMNCPGHIQIFNQGLKSYRDLPLRMAEFGSC 362
                                     A +   C  H ++ +   +   D PLR+ E G C
Sbjct: 82  --------------------------AFRGGTCAAH-RLVHALARRAEDGPLRLFELGVC 114

Query: 363 HRNEPSGSLHGIMRVR------GFTQDDAHIFCTEDQIQQEVTSCIKMVYDTYTTFGFQN 416
           HR  P   L G            FT D+AH+FC  D    EV   +     T   FGF  
Sbjct: 115 HRGGPGEGLLGGAAFTPPAVGTAFTTDEAHVFCPADHCVAEVARIVTASAATLAAFGFPV 174

Query: 417 IVVKLSTRPEKRVGSD-EIWDKSEQALIDSLKAMDIPFEIQEGEGAFYGPK-IEFTLYDC 474
           I V+  T    R G +  +   + +A      A         GEGA  G   + F + D 
Sbjct: 175 IGVRWGT---ARAGEECPLAAGARRAGYQPGLAAG-----PAGEGAPTGGSWLVFEVDDG 226

Query: 475 LDRAWQCGTVQLDFNLPTRLGATYVGESNERLIPVMIHRAILGSLERFIGILIEEYAGFF 534
              AW CG + L+           +G + ER I ++ HR + GSLE  +G+L+    G+ 
Sbjct: 227 AGGAWPCGGLTLE--------GEAIGGAGERAI-LLCHR-LFGSLEAAVGLLLARGDGWL 276

Query: 535 PTWLAPEQAVVVNITDKQADYAHEVAQKLQKCGIRAKADLRNEKIGFKIREHTLKRVPYM 594
             WLAP+Q ++     ++A     +A +  + G+R  ADL  E +G K        +P +
Sbjct: 277 APWLAPQQVLLAGTAAEEA-IVRSIAGRFAEAGLRVGADLGAESLGVKRARARALGIPVV 335

Query: 595 LVCGDQE 601
              G +E
Sbjct: 336 ASLGPRE 342