Pairwise Alignments

Query, 642 a.a., threonine--tRNA ligase from Vibrio cholerae E7946 ATCC 55056

Subject, 654 a.a., threonyl-tRNA synthetase (RefSeq) from Dinoroseobacter shibae DFL-12

 Score =  663 bits (1710), Expect = 0.0
 Identities = 326/637 (51%), Positives = 434/637 (68%), Gaps = 9/637 (1%)

Query: 4   ITLPDGSQRHFDNPVSTLEVAQSIGPGLAKATIAGRVNGARVDACDLIEHDASLEIITTK 63
           +T PDG+ R FD  V+  EVA SI   L K  I+  VNGA  D    I+ DAS+ I T K
Sbjct: 6   LTFPDGNARDFDAGVTPAEVAASISTSLGKKAISATVNGAHHDLQWPIDADASIAIHTLK 65

Query: 64  DEVDGLEIVRHSCAHLLGHALKQLYPNAKMAIGPTIDSGFYYDIDLEQSLSQEDLEKIEA 123
           D+   LE++RH CAH++  A+++++P+ K+ IGP I++GFYYD D  +  + EDL  IEA
Sbjct: 66  DDAQALELIRHDCAHIMARAVQEIWPDVKVTIGPVIENGFYYDFDRAEPFTPEDLGAIEA 125

Query: 124 RMVELAKTKYAVVKKKVSWQEARDTFESRGESYKMEILDENVARDDRPGLYHHEEYIDMC 183
           +M E+   +  V  +      A   +E+ GE YK+E++ E +  ++   +Y H ++ D+C
Sbjct: 126 KMKEIINARDPVRTEVWDRPRAIAHYEANGEPYKVELI-EAIPGNEPLRMYWHGDWQDLC 184

Query: 184 RGPHVPHMGF--CQNFKLLNIAGAYWRGNSDNKMLQRIYGTAFHDKKALQAHLTRLEEAA 241
           RGPH+ H G     +FKL+++AGAYWRG+S   MLQRIYG AF ++ AL+ HL  LEEAA
Sbjct: 185 RGPHLQHTGQVPADSFKLMSVAGAYWRGDSSRPMLQRIYGVAFQNRDALKKHLHMLEEAA 244

Query: 242 KRDHRKIGKQLDLFHMQQEAPGMVFWHHNGWSIFRDLEIFIRQKLNEYGYQEVKGPLMMD 301
           KRDHRK+G++++LFHMQ+EAPG VFWH NGW+++  L+ ++R++  E GY EV  P ++D
Sbjct: 245 KRDHRKLGREMNLFHMQEEAPGQVFWHPNGWTVYTTLQDYMRRRQRENGYVEVNTPQVVD 304

Query: 302 RVLWERSGHWDKYADAMFTTSSEN---REYAI---KPMNCPGHIQIFNQGLKSYRDLPLR 355
           R LWE SGHWDKY + MF    +    RE AI   KPMNCP H+Q++NQGLKSYRDLPLR
Sbjct: 305 RKLWEASGHWDKYQENMFIVEVDEEHAREKAINALKPMNCPCHVQVYNQGLKSYRDLPLR 364

Query: 356 MAEFGSCHRNEPSGSLHGIMRVRGFTQDDAHIFCTEDQIQQEVTSCIKMVYDTYTTFGFQ 415
           MAEFG+C+R EPSG+LHG+MRVRGFTQDDAHIFCTEDQIQ E    I+M+   Y   GF+
Sbjct: 365 MAEFGACNRYEPSGALHGLMRVRGFTQDDAHIFCTEDQIQDETARFIRMLSTIYRDLGFE 424

Query: 416 NIVVKLSTRPEKRVGSDEIWDKSEQALIDSLKAMDIPFEIQEGEGAFYGPKIEFTLYDCL 475
           +  +K STRPE R GSD +WDK+E AL  +++ +   FE+  GEGAFYGPK++F L D +
Sbjct: 425 SFDIKFSTRPEVRAGSDAVWDKAEAALEAAIRTVTDDFELDPGEGAFYGPKLDFKLTDAI 484

Query: 476 DRAWQCGTVQLDFNLPTRLGATYVGESNERLIPVMIHRAILGSLERFIGILIEEYAGFFP 535
            R WQ GT Q DF LP RL ATY+GE   +  PVM+HRAILGS ERF+GILIE +AG  P
Sbjct: 485 GREWQLGTFQADFVLPERLDATYIGEDGAKHRPVMLHRAILGSFERFLGILIENFAGKLP 544

Query: 536 TWLAPEQAVVVNITDKQADYAHEVAQKLQKCGIRAKADLRNEKIGFKIREHTLKRVPYML 595
            WLAP Q VV +I  +  DY  EV   L + GIRA+AD+RNEKI +K+REH++ +VP +L
Sbjct: 545 FWLAPRQVVVASIISEADDYVREVVAALTRAGIRAEADIRNEKINYKVREHSVGKVPVIL 604

Query: 596 VCGDQEMEAGEIAVRTRKGKDLGKFKLDDFIAHIQAE 632
             G +EME   + +R    K      LD  +A + AE
Sbjct: 605 AVGRREMEERTVTLRRLGEKQTSVVGLDALVADLAAE 641