Pairwise Alignments

Query, 326 a.a., IS5 family transposase ISVch5 from Vibrio cholerae E7946 ATCC 55056

Subject, 326 a.a., Mobile element protein from Xanthomonas campestris pv. campestris strain 8004

 Score =  328 bits (841), Expect = 1e-94
 Identities = 170/318 (53%), Positives = 222/318 (69%), Gaps = 3/318 (0%)

Query: 4   QLTFADGEFSNKRRQTRKELFLARMEKLLPWSQLLAVIEPFYPKAGN-GRRPYPLETMFR 62
           QLTF D E   KR+QTR+E+FLA ME+++PW QLL ++ P YP +G  GR+PY L TM R
Sbjct: 2   QLTFGDAEGLGKRKQTRREIFLAEMEQVVPWQQLLGLVAPHYPVSGRPGRQPYALATMLR 61

Query: 63  IHCMQQWYSLSDEAMEDALYEIASMRLFAHLSLDRAIPDRTTIMNFRHLLEQHQLGRSVF 122
           IH +QQWY+LSD AME+AL+EI ++R FA L     +PD TTI+NFR LLE H L   + 
Sbjct: 62  IHLLQQWYALSDPAMEEALHEIPTLRRFAQLGGLDNVPDETTILNFRRLLETHGLAARML 121

Query: 123 EPINQWLSERGVLMKQGTLVDATIIEAPSSTKNKTNQRDPEMHQTKKGNEWHFGMKAHIG 182
           E +N  L+ +G  ++ GT+VDAT+I APSSTKN  + RDPEM QTKKGN+W+FGMKAHIG
Sbjct: 122 EAVNAHLARKGQSLRSGTIVDATLIAAPSSTKNTDHARDPEMRQTKKGNQWYFGMKAHIG 181

Query: 183 VDAKSGLTHTLVTTAANEHDLNQLSNLLHGDEEFVSGDAGYQGAHKRDELKGADVDWLIA 242
           VD  SGL H +  TAAN  D+     LLHG E+ V GD+GY GA KR+EL+  +  + IA
Sbjct: 182 VDEFSGLVHHVHCTAANVADVTVTHALLHGKEDSVFGDSGYTGADKREELQDCEAAFFIA 241

Query: 243 ERPGKVRALKKHPRKNKVAIHIEYLKASIRAKVEHPFRIIKCQFGFIKARYKGLMKNDNQ 302
            +   ++A+  + R+       E+ KAS+RAKVEHPFR+IK QFG+ K RY+GL KN  Q
Sbjct: 242 AKRSVLQAI-GNKRERAREQRWEHFKASVRAKVEHPFRVIKRQFGYTKVRYRGLAKNTAQ 300

Query: 303 LAMLFTLANL-VKVDQLI 319
           +  LF L+NL +K  QL+
Sbjct: 301 VLTLFALSNLWMKRKQLL 318