Pairwise Alignments

Query, 326 a.a., IS5 family transposase ISVch5 from Vibrio cholerae E7946 ATCC 55056

Subject, 460 a.a., transposase IS4 family protein (RefSeq) from Dinoroseobacter shibae DFL-12

 Score = 42.4 bits (98), Expect = 2e-08
 Identities = 41/150 (27%), Positives = 66/150 (44%), Gaps = 5/150 (3%)

Query: 11  EFSNKRRQTRKELFLARMEKLLPWSQLLAVIEPFYPKAGNGRRPYPLETMFRIHCMQQWY 70
           EFS +    +  L L  +++ L  S +   +  FY  +  GR     E M R+  +   +
Sbjct: 15  EFSLEEHVPQDHL-LRSIDRHLDLSSIRGHLADFY--SHTGRPSVDPELMIRMLLVGYCF 71

Query: 71  SL-SDEAMEDALYEIASMRLFAHLSLDRAIPDRTTIMNFRH-LLEQHQLGRSVFEPINQW 128
            + S+  + + ++   + R F  L L   IPD +T    RH       L R VFE     
Sbjct: 72  GIRSERRLCEEVHLNLAYRWFCRLELTDRIPDHSTFSKNRHGRFRDSDLLRHVFEATVAR 131

Query: 129 LSERGVLMKQGTLVDATIIEAPSSTKNKTN 158
             E G++  QG  VDA++I A    +N +N
Sbjct: 132 CIEEGLVGGQGFAVDASLISADVQKQNSSN 161