Pairwise Alignments

Query, 385 a.a., integrase from Vibrio cholerae E7946 ATCC 55056

Subject, 402 a.a., Integrase from Dechlorosoma suillum PS

 Score = 91.3 bits (225), Expect = 4e-23
 Identities = 101/391 (25%), Positives = 174/391 (44%), Gaps = 40/391 (10%)

Query: 3   MAITDAWLRATNGKPYSGKTEISHRFGLGVRVSPKGKITWVYRANINGKMQRIKLGEYPA 62
           MA+T+  ++A+  KP     ++S   GL + V+P G   W  +    GK + + LG YP 
Sbjct: 1   MALTELAIKAS--KPADKPYKVSDERGLFLLVNPNGSKYWRVKYRFLGKEKLLALGVYPE 58

Query: 63  MKLRDAIQARESRAELVELGFDP---RKSTRSANDDSIITLNDLI--DYWAENHARDNIK 117
           + L+ A + R+    L+  G DP   +++T+ A   +     + +  ++WA+     +  
Sbjct: 59  VSLKQARERRDDARRLLANGVDPGFHKQATKMAMVANAANSFEAVAREWWAKKSVGWSAS 118

Query: 118 QCDALLKMFHTDITPTLGNYPAKQLELIDFMPVFLKAKRRVSAK---HSANLMTRFK-QV 173
             + ++++F  D+ P +G  P   +      P  L   RR+ A+    +A+L  R   Q 
Sbjct: 119 YSNKVIRLFERDVFPWVGARPIADIT----APEMLAVVRRIEARGVIETAHLALRVSGQA 174

Query: 174 LSYAVRHGLLKYNVLTELKKADVGVPTTPKRSRQDEQGVKALWKAIDDISIHESNKNFLR 233
             YAV  G  + + + +L+ A   V  +   +  + + V  L +AID  S        L+
Sbjct: 175 FRYAVVTGRAERSPVGDLRGALPPVKVSHFAAITEPEKVGELLRAIDAFSGTFVVLCALK 234

Query: 234 LMLIFANRSNELRLAKKADFDLEKRVWTVPEENNKVRKKQGGAIRRAIPPLAEK---IIM 290
           L  +F  R  ELR A+  DFDLE+  W        V K Q     + + PLA +   I+ 
Sbjct: 235 LAPLFFVRPGELRHARWRDFDLERGEW-----RYLVTKTQ----TQHLVPLATQAIGILR 285

Query: 291 EQFAIWPNHTMMFPPVNTEQDRPMSANVPVDFGSKLADRIEELGFPRTTN---HDMRRTA 347
           E +A+      +FP    ++  PMS       G+ +   +  +G+   T+   H  R  A
Sbjct: 286 ELYALTGRGDFVFP--GRDRANPMS-------GATINAALRRMGYNTQTDITGHGFRAMA 336

Query: 348 RNIW-ESMGVPYHVAETMLGHKVHTGVQSHY 377
           R I  E + V   V E  L H+V   + + Y
Sbjct: 337 RTILAEELHVKPEVIEHQLAHRVPDNLGTAY 367