Pairwise Alignments

Query, 385 a.a., integrase from Vibrio cholerae E7946 ATCC 55056

Subject, 433 a.a., Integrase from Dechlorosoma suillum PS

 Score = 71.6 bits (174), Expect = 4e-17
 Identities = 92/396 (23%), Positives = 159/396 (40%), Gaps = 40/396 (10%)

Query: 1   MSMAITDAWLRATNGKPYSGKTEISHRFGLGVRVSPKGKITWVYRANINGKMQRI-KLGE 59
           M+  +TD  +R  N KP     ++    GL + V P G   W YR  I  +   I  +GE
Sbjct: 1   MASPLTDTKVR--NAKPAEKPYKLQDGQGLYLDVRPSGAKFWRYRYWITPEKDGIYTIGE 58

Query: 60  YPAMKLRDAIQARESRAELVELGFDP---------RKSTRSANDDSIIT---LNDLIDYW 107
           YP + L DA + RE   E  + G +P         R+    AN    +    ++   ++W
Sbjct: 59  YPVVSLSDARREREWAREQAKQGINPTHAKEAERLRRMGEHANTFEAVAREWIDQNRNHW 118

Query: 108 AENHARDNIKQCDALLKMFHTDITPTLGNYPAKQLELIDFMPVFLKAKRRVSAKHSANLM 167
            E +    + Q +  L     D+ P +G  P + +     + +    + R  AK  A L+
Sbjct: 119 TEKY----LYQVERFLG---NDVFPKIGALPIRMVTSAHLLGIIRTVEER-GAKSIAVLI 170

Query: 168 TRFK-QVLSYAVRHGLLKYNVLTELKKADVGVPT--TPKRSRQDEQGVKALWKAIDDISI 224
            ++  Q+  YAV       +    L+ A    P    P  S+ +   +  +   +     
Sbjct: 171 RQWSGQIFRYAVATLRADSDPSAPLRGAIKKDPVRHNPPLSKDE---IPVMLNKLQKYGG 227

Query: 225 HESNKNFLRLMLIFANRSNELRLAKKADFDLEKRVWTVPEENNKVRKKQGGAIRRAIP-- 282
           +       +LML    R+ ELR A+  +FDLE   W VP +  K++K+        +P  
Sbjct: 228 YRGTVLATKLMLYTFVRTVELRKAEWTEFDLEGGEWRVPADRMKMKKQMKVGESHIVPLS 287

Query: 283 PLAEKIIMEQFAIWPNHTMMFPPVNTEQDRPMSANVPVDFGSKLADRIEELGFP-RTTNH 341
             A +++ E   +      +FP + T  D  M+A       + +   +E +G+  + + H
Sbjct: 288 RQALEVLKELKTLSGGRKFLFPNLRT-PDTCMTA-------TTINKALERMGYAGKFSGH 339

Query: 342 DMRRTARNIWESMGVPYHVAETMLGHKVHTGVQSHY 377
             R TA  +   +G      E  L H     V++ Y
Sbjct: 340 GFRATASTMLHELGWNEKAIERQLAHAERNKVKAAY 375