Pairwise Alignments

Query, 385 a.a., integrase from Vibrio cholerae E7946 ATCC 55056

Subject, 449 a.a., phage integrase family protein from Marinobacter adhaerens HP15

 Score = 75.5 bits (184), Expect = 3e-18
 Identities = 83/368 (22%), Positives = 155/368 (42%), Gaps = 17/368 (4%)

Query: 20  GKTEISHRFGLGVRVS--PKGKITWVYRANINGKMQRIKLGEYPAMKLRDAIQARESRAE 77
           G  + S + GL +R +    G+++ +Y+A I   ++  +  E  A K     +    RAE
Sbjct: 59  GNYDQSGKDGLTLREARTKAGELSRLYQAGIRD-LREYQEAEEDARKATHEAEMARLRAE 117

Query: 78  LVELGFDPRKSTRSANDDSIITLNDLIDYWAENHARDNIKQCDALLKMFHTDITPTLGNY 137
                 +  K+ ++A      T+ +L ++WA+   ++       + ++F  D+ P +G  
Sbjct: 118 --REAAEAEKARQAARK----TVTELFEHWADIDLKNRKDGGAEVRRLFEKDVLPKIGQL 171

Query: 138 PAKQLELIDFMPVFLKAKRRVSAKHSANLMTRFKQVLSYAVRHGLLKYNVLTELKKADVG 197
             + ++      V      R   + +   ++  +Q+  +AV   L++Y+    ++K+ +G
Sbjct: 172 AVEDVKKGHVTEVVDAQLNRGVTRMAKLTLSLIRQMFRFAVDRDLIEYDPTASIRKSKIG 231

Query: 198 VPTTPKRSRQDEQGVKALWKAIDDISIHESNKNFLRLMLIFANRSNELRLAKKADFDLEK 257
                +    ++  +KAL   I D  +  S    + +ML    R  EL  A+  D +L++
Sbjct: 232 GKDVERDRVLNDGEIKALANQIPDAQMLPSTSIAIWIMLTTCCRIGELIKAEWVDVNLKQ 291

Query: 258 RVWTVPEENNKVRKKQGGAIRR---AIPPLAEKIIMEQFAIWPNHT---MMFPPVNTEQ- 310
             W +P EN+K  K    A+     A     EK+  +    +PN +    + P   T+Q 
Sbjct: 292 GAWKIPAENSKNGKPHEIALSSFAVAWFKDLEKLSGDSRWCYPNSSDTGSVCPKSITKQI 351

Query: 311 -DRPMSANVPVDFGSKLADRIEELGFPRTTNHDMRRTARNIWESMGVPYHVAETMLGHKV 369
            DR +        G     +   L   + T HD+RRT   I  + GV   VAE  L H  
Sbjct: 352 RDRQLPTGKEPSKGRSSKAQALVLSGGKWTPHDLRRTGATIMTAQGVIPEVAERCLNHTE 411

Query: 370 HTGVQSHY 377
              V+  Y
Sbjct: 412 ENKVKRVY 419