Pairwise Alignments

Query, 385 a.a., integrase from Vibrio cholerae E7946 ATCC 55056

Subject, 409 a.a., integrase from Klebsiella michiganensis M5al

 Score =  144 bits (363), Expect = 4e-39
 Identities = 101/378 (26%), Positives = 172/378 (45%), Gaps = 18/378 (4%)

Query: 5   ITDAWLRATNGKPYSGKTEISHRFGLGVRVSPKGKITWVYRANINGKMQRIKLGEYPAMK 64
           +TD  LR    K       IS   GL VR+S  G IT+ YR   NGK  ++ +G+YP + 
Sbjct: 16  LTDTKLRKALSKKRDKIEVISDAHGLNVRLSTSGSITFFYRYRWNGKAVQLTIGDYPTIS 75

Query: 65  LRDAIQARESRAELVELGFDPRKST--RSANDDSIITLNDLIDYWAENHA-RDNIKQCDA 121
           L  A + R+     +  G DPR+ T          +T+ +  DYW + +   + + +   
Sbjct: 76  LSQARERRQQLRAWLTEGLDPRRQTVLEKQKKTEALTVKEAFDYWEKFYCIPEGLVKIKV 135

Query: 122 LLKMFHTDITPTLGNYPAKQLELIDFMPVFLKAKRRVSAKHSANLMTRFKQVLSYAVRHG 181
             + F+  I P LG+    Q     ++ +F    RRV       LM R      +    G
Sbjct: 136 NRRDFNNHIAPVLGDMIVDQTTKAHWLNLFDGMGRRVVTGQMLGLMQR---TFRFCSNRG 192

Query: 182 LLKYNVLTELKKADVGVPTTPKRSRQDEQGVKALWKAIDDISIHESNKNFLRLMLIFANR 241
           ++ +N +  L+++DVG+    K     ++ +KA+W  + ++      +  ++ +++   R
Sbjct: 193 VINFNPIESLRRSDVGLTAAVKDRWLSDEEIKAVWNVLPEMK--HRQQLIMKFLIMTGCR 250

Query: 242 SNELRLAKKADFDLEKRVWTVPEENNKVRKKQGGAIRRAIPPLAEKII-MEQFAIWPNHT 300
           S E+R AK   FD ++  WT+P  + K     G ++RRA+P    +++  E+     NH 
Sbjct: 251 STEIRTAKWEWFDFQEEAWTIPASDYKT----GKSVRRALPEAVVRMMKAEKETSLSNHV 306

Query: 301 MMFPPV-NTEQDRPMSANVPVDFGSKLADRIEELGFPRTTNHDMRRTARNIWESMGVPYH 359
           +        E DRP        F +++  R    G    + HD+RRT       +G P H
Sbjct: 307 VTLSRYKGPEDDRPPLQPNVASFSAQIVAR---TGMKTWSLHDLRRTIATRLSELGAPPH 363

Query: 360 VAETMLGHKVHTGVQSHY 377
           V E +LGH + +GV + Y
Sbjct: 364 VIEKLLGHHM-SGVMARY 380