Pairwise Alignments

Query, 385 a.a., integrase from Vibrio cholerae E7946 ATCC 55056

Subject, 420 a.a., site-specific recombinase, phage integrase family protein from Klebsiella michiganensis M5al

 Score = 67.0 bits (162), Expect = 9e-16
 Identities = 85/383 (22%), Positives = 149/383 (38%), Gaps = 33/383 (8%)

Query: 16  KPYSGKTEISHRFGLGVRVSPKGKITW--VYRANINGKMQRIKLGEYPAMKLRDAIQARE 73
           KP     +++   GL + VS KG   W   YR   + K  R+  G +P + L  A   R+
Sbjct: 12  KPKDKTYKMADGGGLYLEVSAKGSKYWRMKYRRPSDKKEDRLAFGVWPTVTLAQARAKRD 71

Query: 74  SRAELVELGFDPRKSTRSANDDS--IITLNDLIDYWAENHARDNIKQCDALLKMFHTDIT 131
              +L+  G DP+   + A  ++    T   +   W  ++ R +      +L+     I 
Sbjct: 72  EAKKLLVQGIDPKAEQKEAQAENSGAYTFETIAREWHASNKRWSEDHRSRVLRYLELYIF 131

Query: 132 PTLGNYPAKQLELIDFMPVFLKAKRRVSAKHSA--NLMTRFKQVLSYAVRHGLLKYNVLT 189
           P +G    +QL+    +    K     S KH     L  R   ++ YAV++  +  N  +
Sbjct: 132 PYIGTSDIRQLKTSHLLAPIKKVD--ASGKHDVAQRLQQRVTAIMRYAVQNDYIDSNPAS 189

Query: 190 ELKKADVGVPTTPKRSRQDEQGVKALWKAIDDISIHESN---KNFLRLMLIFANRSNELR 246
           ++     G  +T K             + +  ++ +      +  + L L+   RS+ELR
Sbjct: 190 DM----AGALSTTKARHYPALPSSRFPEFLARLAAYRGRVMTRIAVELSLLTFVRSSELR 245

Query: 247 LAKKADFDLEKRVWTVP---EENNKVRKKQGGAIRRA--IPPLAEK--IIMEQFAIWPNH 299
            A+  +FD +K +W VP   EE   VR    G   +   I PL+ +  I++ Q       
Sbjct: 246 FARWEEFDFDKSLWRVPAKREEIKGVRYSYRGMKMKEEHIVPLSRQAMILLAQLKQISGD 305

Query: 300 TMMFPPVNTEQDRPMSANVPVDFGSKLADRIEELGFPRTT---NHDMRRTARNIWESMGV 356
             +  P + +  + MS N        +   +  +G+   T    H  R  AR      G+
Sbjct: 306 KELLFPGDHDATKVMSENT-------VNSALRAMGYDTKTEVCGHGFRTMARGALGESGL 358

Query: 357 -PYHVAETMLGHKVHTGVQSHYL 378
                 E  L H     V++ Y+
Sbjct: 359 WSDDAIERQLSHSERNNVRAAYI 381