Pairwise Alignments

Query, 376 a.a., glycine cleavage system aminomethyltransferase T from Vibrio cholerae E7946 ATCC 55056

Subject, 364 a.a., glycine cleavage system T protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  166 bits (419), Expect = 1e-45
 Identities = 131/375 (34%), Positives = 196/375 (52%), Gaps = 39/375 (10%)

Query: 11  TPLHALHIEVGAKMVPFAGYDMPVQYALGVKKEHIHTREAAGLFDVSHMGQLRLYGAQAA 70
           T L   H+E  AKMV F G+DMP+ Y   +++ H   R+ AG+FDVSHM  + + G  A 
Sbjct: 5   TVLFNKHLESNAKMVDFHGWDMPLNYGSQIEEHHA-VRQDAGMFDVSHMTVVDVTGTDAC 63

Query: 71  AALEALVPVDIIDLPV-GKQRYAFFTNAQGGIMDDLMVANMGDHLF-VVVNAACKAQDIA 128
           A L  L+  D+  L V GK  Y    +   GI+DDL+   + D  + VVVN+A + +D+A
Sbjct: 64  AFLRKLLANDVAKLKVPGKALYGGMLDDNAGIIDDLITYYLTDTFYRVVVNSATREKDLA 123

Query: 129 HL-KAHLPADVEMEVIEDRALLALQGPKAAQVLARLQPAVAKMLFMDVQLLEIDGAE--- 184
            + K     DV +    + A++A+QGP A         A A  +F   Q   I+G +   
Sbjct: 124 WIAKQSQGFDVTVTERPELAMIAVQGPNAK--------AKAAAVFSSEQNAAIEGMKPFF 175

Query: 185 ------CIVSRSGYTGEDGYEISVPADKAAALARKLTDFEEVEWIGLGARDSLRLECGLC 238
                   ++ +GYTGE GYEI VP  +A AL + L D + V+  GLGARD+LRLE G+ 
Sbjct: 176 GKQAGSLFIATTGYTGEAGYEIIVPETEAEALWQALLD-QGVKPCGLGARDTLRLEAGMN 234

Query: 239 LYGHDLDPTTTPVEASLLWAI--QPVRRKGGAREGGFPGAEIILSQIETKQVSRKRVGLI 296
           LYG D+D T  P+ A++ W I  +P  R        F G + + +  +    + K VGL+
Sbjct: 235 LYGLDMDETINPLAANMGWTIAWEPTDR-------DFIGRKALEALRDAG--TDKLVGLV 285

Query: 297 GQTKAPVREGTELF--DAQG-NKIGIVTSGTAGPTADKPVSMAYVSTEHAALGGEVFADV 353
            + K  +R    +F  DA G  + G++TSGT  PT    ++MA V    +++G     ++
Sbjct: 286 MEEKGVLRHDMPVFFTDAAGVEQQGVITSGTFSPTLGYSIAMARVP---SSIGDTAEVEM 342

Query: 354 RGKMLPMTVEKMPFV 368
           R K + + V    FV
Sbjct: 343 RKKRVAVRVVAPNFV 357