Pairwise Alignments

Query, 207 a.a., XRE family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 201 a.a., Helix-turn-helix motif protein from Pseudomonas syringae pv. syringae B728a

 Score = 51.6 bits (122), Expect = 1e-11
 Identities = 46/169 (27%), Positives = 76/169 (44%), Gaps = 14/169 (8%)

Query: 28  LGQRIKDIRTRLGITLEEASQRTGLARSTLSKIENEQISPTFQAMQKLAHGLQIEMPQLF 87
           LG +IK  R    + L + ++  G+++  LSKIEN Q+S +   + +L   L + M +LF
Sbjct: 17  LGIQIKRQRQAQELKLADVARIAGISQGMLSKIENAQVSTSLDNLSRLCDVLGMPMSKLF 76

Query: 88  EPPKK-------IVATGRRDITRKEAGKPHPTQTYEHELLATQLSNKKMMPFKSRVRARA 140
               +       + A    ++ R+   K H      + LL      KK           A
Sbjct: 77  SQYDQQGSSALLVKADEGLEVVRRGTEKGH-----TYHLLNHTRGPKKSFEAYMVTMDDA 131

Query: 141 FEEYSDWVRHDGEEFLLILEGEVMFYSEFYEPVHLVEGDSVYYDANMGH 189
            EE+  +  H G EFL +LEGE + Y    +   +  GDS+ +D ++ H
Sbjct: 132 SEEFPTF-SHPGTEFLHLLEGE-LIYRHGNQLYPMQAGDSLTFDGDIPH 178