Pairwise Alignments

Query, 435 a.a., serine hydroxymethyltransferase from Vibrio cholerae E7946 ATCC 55056

Subject, 417 a.a., serine hydroxymethyltransferase (RefSeq) from Shewanella loihica PV-4

 Score =  473 bits (1218), Expect = e-138
 Identities = 240/415 (57%), Positives = 300/415 (72%), Gaps = 8/415 (1%)

Query: 22  LAATNDAVFAAIQAEYTRQNEQIELIASENIVSKAVMQAQGTCLTNKYAEGYPGRRYYGG 81
           +A  +  +F AIQ E  RQ E IELIASEN  S  VM+AQG+ LTNKYAEGYPG+RYYGG
Sbjct: 8   IADFDPQLFQAIQEETRRQEEHIELIASENYTSPRVMEAQGSQLTNKYAEGYPGKRYYGG 67

Query: 82  CEHVDSVEQIAIERAKMLFQCQYANVQPHSGAQANGAVMLALLQPGDTIMGMSLDAGGHL 141
           CEHVD VE +AIERAK LF   YANVQPHSG+QAN AV +ALLQPGDT++GM+L  GGHL
Sbjct: 68  CEHVDIVENLAIERAKELFGATYANVQPHSGSQANSAVYMALLQPGDTVLGMNLAHGGHL 127

Query: 142 THGARPALSGKWFNAVQYGVDRQTLEINYDSVRALALEHKPKMIIAGGSAIPRTIDFAQF 201
           THG+    SGK +N V YG+D ++ +I+YD +  LA+EHKPKM+I G SA    +D+A+ 
Sbjct: 128 THGSPVNFSGKLYNIVPYGID-ESGKIDYDEMERLAVEHKPKMMIGGFSAYSGIVDWARM 186

Query: 202 RSIVDEVGALLMVDMAHIAGLVATGAHPSPLPHAHVVTTTTHKTLRGPRGGMILT--NSE 259
           R I D++GA L VDMAH+AGL+A G +P+P+PHAHVVT+TTHKTL GPRGG+IL+  N E
Sbjct: 187 REIADKIGAYLFVDMAHVAGLIAAGVYPNPVPHAHVVTSTTHKTLAGPRGGIILSAANDE 246

Query: 260 EIHKKINSAVFPGLQGGPLMHVIAAKAVAFGEALGPEFRTYIDSVIDNAKVLAEVLQTRG 319
           +++KK+NSAVFPG QGGPLMHVIA KAVAF EAL PEF+ Y   V+ NAK +A     RG
Sbjct: 247 DLYKKLNSAVFPGGQGGPLMHVIAGKAVAFKEALSPEFKEYQQQVVVNAKAMANTFIERG 306

Query: 320 CDIVTGGTDTHLMLVDLRPKGLKGNQVEQALERAGITCNKNGIPFDEEKPMITSGIRLGT 379
            D+V+GGT+ HL L+DL  K + G   + AL RA IT NKN +P D   P +TSG+R+G+
Sbjct: 307 FDVVSGGTENHLFLLDLIAKDITGKDADAALGRANITVNKNSVPNDPRSPFVTSGLRIGS 366

Query: 380 PAGTSRGFGREEFKLIGEWIGDVLDGLVASPEGNPDVEQQVRKQVKALCQRFPLY 434
           PA T RGF   E   +  WI DVLD +      N    ++V+ QV  LC +FP+Y
Sbjct: 367 PAITRRGFKEAEAVELTNWICDVLDDI-----NNEATIERVKNQVLELCAKFPVY 416