Pairwise Alignments

Query, 435 a.a., serine hydroxymethyltransferase from Vibrio cholerae E7946 ATCC 55056

Subject, 417 a.a., serine hydroxymethyltransferase (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  480 bits (1235), Expect = e-140
 Identities = 245/415 (59%), Positives = 305/415 (73%), Gaps = 8/415 (1%)

Query: 22  LAATNDAVFAAIQAEYTRQNEQIELIASENIVSKAVMQAQGTCLTNKYAEGYPGRRYYGG 81
           +A  +  +F AIQ E  RQ E IELIASEN  S  VMQAQG+ LTNKYAEGYPG+RYYGG
Sbjct: 8   IADYDPELFNAIQNETLRQEEHIELIASENYTSPRVMQAQGSQLTNKYAEGYPGKRYYGG 67

Query: 82  CEHVDSVEQIAIERAKMLFQCQYANVQPHSGAQANGAVMLALLQPGDTIMGMSLDAGGHL 141
           CE+VD VE +AIERAK LF   YANVQPHSG+QAN AV +ALL+PGDT++GM+L  GGHL
Sbjct: 68  CEYVDVVETLAIERAKQLFGATYANVQPHSGSQANSAVYMALLKPGDTVLGMNLAHGGHL 127

Query: 142 THGARPALSGKWFNAVQYGVDRQTLEINYDSVRALALEHKPKMIIAGGSAIPRTIDFAQF 201
           THG+    SG+ +N + YG+D ++ +I+YD +  LA+EHKPKM+I G SA    +D+A+ 
Sbjct: 128 THGSPVNFSGRLYNIIPYGID-ESGKIDYDEMERLAVEHKPKMMIGGFSAYSGIVDWARM 186

Query: 202 RSIVDEVGALLMVDMAHIAGLVATGAHPSPLPHAHVVTTTTHKTLRGPRGGMILT--NSE 259
           R I D++GA L VDMAH+AGL+A G +P+P+PHAHVVT+TTHKTL GPRGG+IL+  + E
Sbjct: 187 REIADKIGAYLFVDMAHVAGLIAAGVYPNPVPHAHVVTSTTHKTLAGPRGGIILSAADDE 246

Query: 260 EIHKKINSAVFPGLQGGPLMHVIAAKAVAFGEALGPEFRTYIDSVIDNAKVLAEVLQTRG 319
           E++KK+NSAVFPG QGGPLMHVIA KAVAF EAL PEF+TY   V++NAK + EV   RG
Sbjct: 247 ELYKKLNSAVFPGGQGGPLMHVIAGKAVAFKEALEPEFKTYQQQVVNNAKAMVEVFLERG 306

Query: 320 CDIVTGGTDTHLMLVDLRPKGLKGNQVEQALERAGITCNKNGIPFDEEKPMITSGIRLGT 379
             IV+GGT  HLMLVDL  + L G + + AL  A IT NKN +P D   P +TSG+R+GT
Sbjct: 307 YKIVSGGTSNHLMLVDLIGRDLTGKEADAALGSANITVNKNSVPNDPRSPFVTSGVRIGT 366

Query: 380 PAGTSRGFGREEFKLIGEWIGDVLDGLVASPEGNPDVEQQVRKQVKALCQRFPLY 434
           PA T RGF   E K +  WI D+LD        NP V ++V+ QV ALC RFP+Y
Sbjct: 367 PAITRRGFKEAEAKQLTGWICDILD-----DAHNPAVIERVKGQVLALCARFPVY 416