Pairwise Alignments

Query, 954 a.a., glycine dehydrogenase (decarboxylating) from Vibrio cholerae E7946 ATCC 55056

Subject, 526 a.a., glycine cleavage system protein P, C-terminal domain from Caulobacter crescentus NA1000

 Score =  297 bits (761), Expect = 1e-84
 Identities = 179/440 (40%), Positives = 242/440 (55%), Gaps = 33/440 (7%)

Query: 480 SETQMLRYMKHLENKDFSLTHGMIPLGSCTMKLNATAEMIPVTWPEFGALHPFVPKAQAA 539
           SE + +R+   L  K+ ++   + PLGSCTMK N          P F  +HP  P++   
Sbjct: 77  SEPETVRHYVRLSQKNHAIDLALYPLGSCTMKHNPRLNEKMARLPGFSDIHPLQPQSTVQ 136

Query: 540 GYAALAEDLKQKLCEITGYDAFSLQPNSGASGEYAGLVAIQRYHQSRGEGHRNVCLIPSS 599
           G   L + L   L  +TG  A +L P +GA GE  GL+AI+  H++ G GHR   L P+S
Sbjct: 137 GALELMDRLAHWLKTLTGMPAVALTPKAGAHGELCGLLAIRAAHEAAGNGHRKTVLAPTS 196

Query: 600 AHGTNPATAAMVSMKVVVVKCDENGNIDMVDLADKIEKHKDHLSSIMITYPSTHGVYEQQ 659
           AHGTNPATAA V   VV +   E+G +D+ DL  K+    DH+++IM+T P+T G++E+ 
Sbjct: 197 AHGTNPATAAFVGYTVVEIAQTEDGRVDLADLESKL---GDHVAAIMVTNPNTCGLFERD 253

Query: 660 VREVCEMVHAAGGQVYLDGANMNAQVGLTSPGFIGSDVSHLNLHKTFCIPHGGGGPGMGP 719
           V E+  + HAAG   Y DGAN NA VG   PG +G D  H+NLHKTF  PHGGGGPG GP
Sbjct: 254 VVEIARLTHAAGAYFYCDGANFNAIVGRVRPGDLGVDAMHINLHKTFSTPHGGGGPGAGP 313

Query: 720 IGVKSHLAPFLP----GHIEGGVE-----GSDFAVSA-----ADLGSASILPISWAYIAM 765
           + +   LAPF P     H + G E     G D A +A     A  G   +   ++AY+  
Sbjct: 314 VVLSEALAPFAPTPWLTHGDNGFELAEHAGDDDAKTAFGRMSAFHGQMGMYVRAYAYMLS 373

Query: 766 MGADGLAEATKLAILNANYVMERLR----PHYPILYRGANGRVAHECIIDIRPLKEETGI 821
            GADGL +  + A+LNANY+  +L+    P +P       G   HE + D   L E TG+
Sbjct: 374 HGADGLRQVAEDAVLNANYIKAQLKDVMSPAFP------EGPCMHEALFDDSWL-EGTGV 426

Query: 822 SEEDIAKRLMDYGFHAPTMSFP--VAGTLMVEPTESEDLAELDRFCDALIAIRGEIDKVK 879
           +  D AK ++D GFH  TM FP  V G +++EPTE+E   ELDRF  AL A+ G     K
Sbjct: 427 TTLDFAKAMIDEGFHPMTMYFPLVVHGAMLIEPTETESKHELDRFIAALRALAG---AAK 483

Query: 880 NGEWPLESNPLVHAPHTQAD 899
            G+         HAP  + D
Sbjct: 484 AGDTERFKGAPFHAPLRRLD 503



 Score = 31.2 bits (69), Expect = 2e-04
 Identities = 80/349 (22%), Positives = 123/349 (35%), Gaps = 46/349 (13%)

Query: 53  EAPMQLAPAQSEADMLATMKSFAKLNQLKRTFIGQGYYN----TFTPNVILRNVMENPGW 108
           +AP+ L P  SE +   T++ + +L+Q K   I    Y     T   N  L   M     
Sbjct: 68  DAPIGL-PGLSEPE---TVRHYVRLSQ-KNHAIDLALYPLGSCTMKHNPRLNEKMARLPG 122

Query: 109 YTAYTPYQPEIS-QGRLESLLNYQQMVMDLTAMEIANASLLDEATAAAEAMALC------ 161
           ++   P QP+ + QG LE +      +  LT M     +L  +A A  E   L       
Sbjct: 123 FSDIHPLQPQSTVQGALELMDRLAHWLKTLTGMPAV--ALTPKAGAHGELCGLLAIRAAH 180

Query: 162 QRAGKSKSNLFFVADDVHPQTIEVVKTRAAFLGFEV---------KVDSIDNITQ--QEA 210
           + AG             H          AAF+G+ V         +VD  D  ++     
Sbjct: 181 EAAGNGHRKTVLAPTSAHGTN----PATAAFVGYTVVEIAQTEDGRVDLADLESKLGDHV 236

Query: 211 FGALLQYPGTTGEV-RDLTDIIAKAQA-NKTLVTVATDLLASVLLKPAGEMGADVV-IGS 267
              ++  P T G   RD+ +I     A          +  A V     G++G D + I  
Sbjct: 237 AAIMVTNPNTCGLFERDVVEIARLTHAAGAYFYCDGANFNAIVGRVRPGDLGVDAMHINL 296

Query: 268 AQRFGVPMGYGGPHAAFMATRDAHKRTMPGRVIGVSIDAKGNQALRMAMQTREQHIRREK 327
            + F  P G GGP A  +   +A     P   +       G+    +A    +   +   
Sbjct: 297 HKTFSTPHGGGGPGAGPVVLSEALAPFAPTPWL-----THGDNGFELAEHAGDDDAKTAF 351

Query: 328 ATSNICTAQALLANMAAFYAVYHGPQGLRTIARRAHHLTAILAAGLTKA 376
              +    Q  +   A  Y + HG  GLR +A       A+L A   KA
Sbjct: 352 GRMSAFHGQMGMYVRAYAYMLSHGADGLRQVAE-----DAVLNANYIKA 395