Pairwise Alignments

Query, 954 a.a., glycine dehydrogenase (decarboxylating) from Vibrio cholerae E7946 ATCC 55056

Subject, 962 a.a., glycine dehydrogenase (RefSeq) from Shewanella sp. ANA-3

 Score = 1181 bits (3056), Expect = 0.0
 Identities = 588/960 (61%), Positives = 721/960 (75%), Gaps = 10/960 (1%)

Query: 3   ELLHSLSTQNEFVARHNGPDKQEQATMLKTVNAESLDALIAQTVPAQIRLEAPMQLAPAQ 62
           + L  L   + F+ RH GPD  +Q  ML  V AESLD L AQ VP  IRL   + +  + 
Sbjct: 4   QTLTQLEQHDLFLRRHIGPDSSQQQEMLNYVGAESLDDLTAQIVPESIRLSQELSIGDSC 63

Query: 63  SEADMLATMKSFAKLNQLKRTFIGQGYYNTFTPNVILRNVMENPGWYTAYTPYQPEISQG 122
            EA+ +A ++  AK NQ+ +++IG GYY T  PNVILRNV ENPGWYTAYTPYQPEI+QG
Sbjct: 64  GEAEGIAYIRGLAKQNQVFKSYIGMGYYGTQVPNVILRNVFENPGWYTAYTPYQPEIAQG 123

Query: 123 RLESLLNYQQMVMDLTAMEIANASLLDEATAAAEAMALCQRAGKSK-SNLFFVADDVHPQ 181
           RLE++LN+QQ+ MDLT +++A+ASLLDEATAAAEAMAL +R  K+K +N+FFVADDV PQ
Sbjct: 124 RLEAILNFQQVSMDLTGLDLASASLLDEATAAAEAMALAKRVSKAKKANIFFVADDVFPQ 183

Query: 182 TIEVVKTRAAFLGFEVKVDSIDNITQQEAFGALLQYPGTTGEVRDLTDIIAKAQANKTLV 241
           T++VVKTRA   GFEV V         E FGAL QY    G++ D TD+ A+ +A   +V
Sbjct: 184 TLDVVKTRAECFGFEVVVGPAHEAVNHELFGALFQYSNRFGQITDFTDLFAELRAKNVIV 243

Query: 242 TVATDLLASVLLKPAGEMGADVVIGSAQRFGVPMGYGGPHAAFMATRDAHKRTMPGRVIG 301
           TVA D++A VLLK  G MGADVV GSAQRFGVPMG+GGPHAAF   RD HKR+MPGR+IG
Sbjct: 244 TVAADIMALVLLKSPGAMGADVVFGSAQRFGVPMGFGGPHAAFFVARDEHKRSMPGRIIG 303

Query: 302 VSIDAKGNQALRMAMQTREQHIRREKATSNICTAQALLANMAAFYAVYHGPQGLRTIARR 361
           VS D +GN+ALRMAMQTREQHIRREKA SNICTAQ LLANMA+FYAV+HGPQGL+TIA R
Sbjct: 304 VSKDTRGNRALRMAMQTREQHIRREKANSNICTAQILLANMASFYAVFHGPQGLKTIASR 363

Query: 362 AHHLTAILAAGLTKAGYELAHQHFFDTLAINTGAKTDALYQAAQQANINLR-KLPNQLGV 420
            +  T ILAAGL   G  L +  +FDT++I  G    A+   A  A +NLR      +GV
Sbjct: 364 INRFTDILAAGLQAKGVSLVNNTWFDTISIK-GLDVAAVNARALAAEMNLRFDADGIVGV 422

Query: 421 SFDETTTVADVEALFAIF---GIKEEVHALSDRIATNELAAIPESCRRQSAFLTHPVFNT 477
           S DETT   D+EALF +    G   +V AL  +I      +IP S  RQ A L+HP FN 
Sbjct: 423 SLDETTIRTDIEALFDVILGAGHGLDVAALDAQIVAQGSQSIPASLVRQDAILSHPTFNR 482

Query: 478 HHSETQMLRYMKHLENKDFSLTHGMIPLGSCTMKLNATAEMIPVTWPEFGALHPFVPKAQ 537
           + SET+M+RY+K LE+KD +L + MI LGSCTMKLNA  EMIPV+WPEF  +HPF P  Q
Sbjct: 483 YQSETEMMRYIKRLESKDLALNYSMISLGSCTMKLNAAVEMIPVSWPEFANMHPFCPLDQ 542

Query: 538 AAGYAALAEDLKQKLCEITGYDAFSLQPNSGASGEYAGLVAIQRYHQSRGEGHRNVCLIP 597
           A GY  L E+L   L  +TGYDA  +QPNSGA GEYAGL+AI++YH+SRGE HRN+CLIP
Sbjct: 543 AKGYTQLIEELSSWLVNVTGYDAVCIQPNSGAQGEYAGLLAIRKYHESRGEAHRNICLIP 602

Query: 598 SSAHGTNPATAAMVSMKVVVVKCDENGNIDMVDLADKIEKHKDHLSSIMITYPSTHGVYE 657
            SAHGTNPA+A +  M+VVV  CD+ GN+D+ DL  K  +  ++LS IMITYPSTHGVYE
Sbjct: 603 QSAHGTNPASAQLAGMQVVVTACDKQGNVDLEDLKAKAAEVAENLSCIMITYPSTHGVYE 662

Query: 658 QQVREVCEMVHAAGGQVYLDGANMNAQVGLTSPGFIGSDVSHLNLHKTFCIPHGGGGPGM 717
           + +RE+C +VH  GGQVYLDGANMNAQVGLTSPGFIG+DVSHLNLHKTF IPHGGGGPGM
Sbjct: 663 ESIREICNIVHQHGGQVYLDGANMNAQVGLTSPGFIGADVSHLNLHKTFAIPHGGGGPGM 722

Query: 718 GPIGVKSHLAPFLPGHI---EGGVEGSDFAVSAADLGSASILPISWAYIAMMGADGLAEA 774
           GPIGVK+HLAPF+ GH+    G    ++ AVSAA  GSA ILPISW YI ++G++GL ++
Sbjct: 723 GPIGVKAHLAPFVAGHVVVKPGRESDNNGAVSAAPYGSAGILPISWMYIKLLGSNGLKKS 782

Query: 775 TKLAILNANYVMERLRPHYPILYRGANGRVAHECIIDIRPLKEETGISEEDIAKRLMDYG 834
           T+ A+LNANYVM++L  HYP+L+RG N RVAHECIID+RP+KE +G++E DIAKRL DYG
Sbjct: 783 TQTALLNANYVMKKLSEHYPVLFRGRNDRVAHECIIDLRPIKEASGVTEMDIAKRLNDYG 842

Query: 835 FHAPTMSFPVAGTLMVEPTESEDLAELDRFCDALIAIRGEIDKVKNGEWPLESNPLVHAP 894
           FHAPTMSFPVAGTLM+EPTESE   ELDRF DA+++IR EI KV+ GEWP ++NPL +AP
Sbjct: 843 FHAPTMSFPVAGTLMIEPTESESKVELDRFIDAMVSIRAEIAKVEAGEWPADNNPLHNAP 902

Query: 895 HTQADLREEKWD-RPYSREIACFPSAHTKASKYWPTVNRVDNVYGDRNLVCSCPSIDSYQ 953
           HT AD+ +  +D RPYSRE+A FPSA  + +K+WPTVNR+D+VYGDRNL C+C  +  Y+
Sbjct: 903 HTMADIMDPAFDSRPYSREVAVFPSAAVRTNKFWPTVNRIDDVYGDRNLFCACVPLSDYE 962