Pairwise Alignments

Query, 145 a.a., IS200/IS605 family transposase IS1004 from Vibrio cholerae E7946 ATCC 55056

Subject, 148 a.a., IS1004 transposase (RefSeq) from Shewanella amazonensis SB2B

 Score =  211 bits (536), Expect = 5e-60
 Identities = 95/140 (67%), Positives = 117/140 (83%), Gaps = 1/140 (0%)

Query: 1   MGDYRSSSHVYWRCKYHIVWTPKFRFKILKGNVAKELNRSIYILCNMKDCEVLELNVQPD 60
           M  Y S+SHV++RC+YH+VWTPK+R+KILKGN+ KEL RSIY+ CNMK C V+ELNVQ D
Sbjct: 1   MSRYESASHVFYRCQYHLVWTPKYRYKILKGNLGKELYRSIYVYCNMKKCRVVELNVQED 60

Query: 61  HVHLVAIIPPKVSISTLMGVLKGRSAIRLFNKFPHIRK-KLWGNHFWARGYFVDTVGVNE 119
           HVHLV   PP +S+S LMG +KGR+AIR+F KFP++RK KLWGNHFW R YFVD+VG NE
Sbjct: 61  HVHLVVRTPPSLSVSDLMGFVKGRTAIRMFAKFPYLRKQKLWGNHFWQRRYFVDSVGANE 120

Query: 120 EIIRRYVRHQDKKELEQEQQ 139
           EIIRRYVRHQ+K   E+E++
Sbjct: 121 EIIRRYVRHQEKTAKEEEKR 140