Pairwise Alignments

Query, 389 a.a., D-alanyl-D-alanine carboxypeptidase from Vibrio cholerae E7946 ATCC 55056

Subject, 325 a.a., Murein-DD-endopeptidase (EC 3.4.99.-) from Pseudomonas fluorescens FW300-N2E2

 Score = 73.2 bits (178), Expect = 1e-17
 Identities = 64/254 (25%), Positives = 119/254 (46%), Gaps = 26/254 (10%)

Query: 34  QLAANGYVLIDFHTGKVLVEHNAHQKLNPASLTKLMTSYVAGQEMKRGNIHADDQVRISN 93
           Q+A+   +L+D  T KV+   N    +  AS+TKLMT  +     +  N+     + I+N
Sbjct: 52  QVASGSAMLLDLQTDKVVYSSNPDVVVPIASVTKLMTGLIVLDAKQ--NLDEYISITIAN 109

Query: 94  NAWAKKFPDSSKMF--IEVGTYVNLMDLYRGLIVQSGNDASVAIAEHVAGSEGAFVSLMN 151
                  P+   +F  +++ + ++  D+    ++ S N A+ ++A H  G   AF++ MN
Sbjct: 110 T------PEMKGVFSRVKLNSELSRRDVLLIALMSSENRAAASLAHHYPGGYAAFIAAMN 163

Query: 152 SWAQQLGMNNSSFANPHGLDNPALYSTPYDIALLGRAIIRDLPEIYPLYSELSFTYN--- 208
           + A+ LGM ++ +  P GL    + ST  D+  L  A  +     YPL SELS T     
Sbjct: 164 AKAKALGMTSTHYVEPTGLSIHNV-STARDLTKLLIAARK-----YPLLSELSTTKEKTV 217

Query: 209 -------GITQHNRNGLLRDRSMNVDGMKTGYTSGAGYSLASSATSGEMRLISVVMGSKS 261
                   +   N + L+   + ++   KTG+T+ AG+ L      G   +  V++ +  
Sbjct: 218 TFRKPVYSLGFRNTDHLVHKANWDIQLTKTGFTNQAGHCLVLVTKMGNRPMALVILDAFG 277

Query: 262 VKSREAESKQLLSY 275
             +  A++ ++ S+
Sbjct: 278 KYTHFADASRIRSW 291