Pairwise Alignments

Query, 389 a.a., D-alanyl-D-alanine carboxypeptidase from Vibrio cholerae E7946 ATCC 55056

Subject, 384 a.a., penicillin-binding precursor (D-alanyl-D-alanine carboxypeptidase fraction A) transmembrane protein from Sinorhizobium meliloti 1021

 Score =  171 bits (434), Expect = 2e-47
 Identities = 118/382 (30%), Positives = 187/382 (48%), Gaps = 9/382 (2%)

Query: 15  MAFVPTLGFSALTV----VPEPPQL--AANGYVLIDFHTGKVLVEHNAHQKLNPASLTKL 68
           M ++  +GF A  V    V + P     A    L+D  TG VL   +    + PASL KL
Sbjct: 3   MKWLAVVGFLAAVVSGQAVAQTPAFDTKAKQIYLVDAETGTVLFSRDEDAPVPPASLAKL 62

Query: 69  MTSYVAGQEMKRGNIHADDQVRISNNAWAKKFPDS--SKMFIEVGTYVNLMDLYRGLIVQ 126
           M   V  + + +G +  +    +S +AW      S  S MF  + + + + DL +G  VQ
Sbjct: 63  MAMEVVFEALDKGELTPETSFEVSEHAWRTGGAPSGTSTMFAAIKSRIRVADLIQGATVQ 122

Query: 127 SGNDASVAIAEHVAGSEGAFVSLMNSWAQQLGMNNSSFANPHGLDNPALYSTPYDIALLG 186
             NDA + +AE +AGSE AF  LM   A+ LG+  ++F N  GL +P    T  ++  L 
Sbjct: 123 LANDACIVLAEGMAGSEAAFAELMTKRARDLGLPVATFKNATGLPHPENKVTMRELVALT 182

Query: 187 RAIIRDLPEIYPLYSELSFTYNGITQHNRNGLLRDRSMNVDGMKTGYTSGAGYSLASSAT 246
           R +    P+ Y LYS+  F +N I Q N+N L+   ++ VDG+ TG+  G G+SLA S  
Sbjct: 183 RHLYEAHPDYYRLYSQPEFEWNKILQRNKNPLIA-ANVGVDGLATGFAEGFGFSLAVSMQ 241

Query: 247 SGEMRLISVVMGSKSVKSREAESKQLLSYGFRFYETVTPHQKDTVIQNQRLWYGDKNEVA 306
            G+ R+   + G +S K R  ES+++L +    +E          I    ++ G  + VA
Sbjct: 242 RGDRRVYLAMGGLESEKERIEESRRVLDWAMTAFEKRRIFADGETIGEASVYGGADSRVA 301

Query: 307 LGSADTVYLTLPRSDVKKLNAVIQLDQNLEAPIAKGDVVGSIFYYIDEEKVGEAKLVSQE 366
           L +   V + LP  + ++L A I     L AP+A G  VG +  +  ++ + E  + +  
Sbjct: 302 LVAGSPVDVLLPVKNPERLTARIVYKWPLNAPVAAGQQVGVVKLWNGDKLLREVPVKTAR 361

Query: 367 SVEQGGIFKRLMDWFKLLFSGW 388
           +VE G +  R +D  + L   W
Sbjct: 362 AVEPGTLTSRAIDALQELLFFW 383