Pairwise Alignments

Query, 389 a.a., D-alanyl-D-alanine carboxypeptidase from Vibrio cholerae E7946 ATCC 55056

Subject, 360 a.a., penicillin-binding protein from Sinorhizobium meliloti 1021

 Score =  150 bits (378), Expect = 7e-41
 Identities = 92/256 (35%), Positives = 141/256 (55%), Gaps = 4/256 (1%)

Query: 36  AANGYVLIDFHTGKVLVEHNAHQKLNPASLTKLMTSYVAGQEMKRGNIHADDQVRISNNA 95
           +AN  ++ID  T KV    +  Q+  PASLTKLMT+Y   + ++ G +     V ++ NA
Sbjct: 17  SANPRLVIDVDTLKVYEHQDIFQRWYPASLTKLMTAYTTFRAIQAGQLTLQSPVVMTKNA 76

Query: 96  WAKKFPDSSKMFIEVGTYVNLMDLYRGLIVQSGNDASVAIAEHVAGSEGAFVSLMNSWAQ 155
            ++     SKMF + G  + L    + ++++S ND +VAIAE V GSE AF+  MN+ A+
Sbjct: 77  ASEP---PSKMFYKPGQKMTLDSALKMMLIKSANDVAVAIAETVGGSEQAFIEKMNAEAR 133

Query: 156 QLGMNNSSFANPHGLDNPALYSTPYDIALLGRAIIRDLPEIYPLYSELSFTYNGITQHNR 215
           ++GM +S F NP+GL     Y+T  D+A+L   + R+ P+ Y  Y  L     G   +  
Sbjct: 134 RIGMTSSHFINPNGLPGQGQYTTARDLAVLAVTLKREFPQ-YASYFALEGFTTGKKDYPN 192

Query: 216 NGLLRDRSMNVDGMKTGYTSGAGYSLASSATSGEMRLISVVMGSKSVKSREAESKQLLSY 275
             +L  R    DGMKTG+   +G++  SSA+ G  R++SVV+G  S+ +R  ES +LL  
Sbjct: 193 YNMLIGRFDGADGMKTGFICASGFNQVSSASRGGRRVVSVVLGEDSLAARADESARLLQM 252

Query: 276 GFRFYETVTPHQKDTV 291
            F    T  P   + V
Sbjct: 253 AFTTVSTGKPSLAEIV 268