Pairwise Alignments

Query, 389 a.a., D-alanyl-D-alanine carboxypeptidase from Vibrio cholerae E7946 ATCC 55056

Subject, 303 a.a., D-alanyl-D-alanine endopeptidase (RefSeq) from Shewanella amazonensis SB2B

 Score = 75.9 bits (185), Expect = 1e-18
 Identities = 68/237 (28%), Positives = 110/237 (46%), Gaps = 24/237 (10%)

Query: 34  QLAANGYVLIDFHTGKVLVEHNAHQKLNPASLTKLMTSYVA-GQEMKRGNIHADDQVRIS 92
           +LA+   +L+D  T +VL   N HQ +  AS++KLMT+ V    ++  G   A   V + 
Sbjct: 36  ELASYSALLVDTKTNEVLYASNPHQVVPIASISKLMTAMVTLDAKLPLGEKIA---VEVK 92

Query: 93  NNAWAKKFPDSSKMFIEVGTYVNLMDLYRGLIVQSGNDASVAIAEHVAGSEGAFVSLMNS 152
           +N   K         I +G+ ++  +     ++ S N A+  +A H  G   AFV  MN+
Sbjct: 93  DNPEMKNVVSR----IRLGSTLSRKEAMLLTLMSSENRAATTLAHHYPGGYQAFVKAMNA 148

Query: 153 WAQQLGMNNSSFANPHGLDNPALYSTPYDIALLGRAIIRDLPEIYPLYSELSFTYN---- 208
            A+ LGM N+ F  P GL    + ST  D+  L +A      + YPL  +LS T +    
Sbjct: 149 KAKALGMTNTRFVEPTGLSVHNV-STAADLVKLLKA-----AQDYPLLGQLSSTPSKSVT 202

Query: 209 ------GITQHNRNGLLRDRSMNVDGMKTGYTSGAGYSLASSATSGEMRLISVVMGS 259
                  +  +N N L+   + ++   KTG+T  AG+ L       +  +  VV+ S
Sbjct: 203 FGKPRYSLAFYNTNRLVNKDNWDIRLTKTGFTDAAGHCLVMLTKMAKRDVAFVVLDS 259