Pairwise Alignments

Query, 389 a.a., D-alanyl-D-alanine carboxypeptidase from Vibrio cholerae E7946 ATCC 55056

Subject, 388 a.a., Serine-type D-Ala-D-Ala carboxypeptidase (NCBI) from Rhodospirillum rubrum S1H

 Score =  252 bits (643), Expect = 1e-71
 Identities = 143/361 (39%), Positives = 212/361 (58%), Gaps = 4/361 (1%)

Query: 21  LGFSALTVVPEPP-QLAANGYVLIDFHTGKVLVEHNAHQKLNPASLTKLMTSYVAGQEMK 79
           L    LT +P    +  A   ++ID  T  VL++ +A   + P+S++KLMT+Y+  + +K
Sbjct: 13  LAAGLLTAMPAQAFETKARHALVIDLDTDTVLLDKDADVPMPPSSMSKLMTAYMLFERLK 72

Query: 80  RGNIHADDQVRISNNAWAKKFPDS--SKMFIEVGTYVNLMDLYRGLIVQSGNDASVAIAE 137
            G++  DD   +S NAW K    S  S MF+  G  V + DL RG+I+QSGNDA V +AE
Sbjct: 73  SGSLSLDDTFSVSENAWRKGGAASGGSTMFLNPGAQVKVHDLMRGIIIQSGNDACVVVAE 132

Query: 138 HVAGSEGAFVSLMNSWAQQLGMNNSSFANPHGLDNPALYSTPYDIALLGRAIIRDLPEIY 197
           ++AG E  F + MN  A++LG+ NS F N  GL +P  Y T +D+ LL   IIRD PE Y
Sbjct: 133 NLAGDEATFAAAMNRRAKELGLTNSHFVNATGLPDPEHYMTAHDLVLLAEHIIRDFPEFY 192

Query: 198 PLYSELSFTYNGITQHNRNGLLRDRSMNVDGMKTGYTSGAGYSLASSATSGEMRLISVVM 257
            +Y E  FTYNGI QHNRN LL   +M  DG+KTG+T+ AG+ L +SA     RL+ V+ 
Sbjct: 193 EIYGETKFTYNGIVQHNRNPLLY-MNMGADGLKTGHTNIAGFGLTASAVQDGRRLLMVIN 251

Query: 258 GSKSVKSREAESKQLLSYGFRFYETVTPHQKDTVIQNQRLWYGDKNEVALGSADTVYLTL 317
           G +S K R  E+++L+S+GFR +ETVT  +    I +  +W G++  V L S + + +TL
Sbjct: 252 GLQSNKERSEEAERLMSWGFRNFETVTLLKAGQPISDADVWMGEEETVPLVSVNDLKITL 311

Query: 318 PRSDVKKLNAVIQLDQNLEAPIAKGDVVGSIFYYIDEEKVGEAKLVSQESVEQGGIFKRL 377
           PR+  + + A    +  + API  GD + ++     +    E  LV+  +VEQ   F R+
Sbjct: 312 PRAARRDMVAKAVFETPIPAPIQAGDRIATLVLTGPDMAKLEYPLVAGRAVEQLSFFGRI 371

Query: 378 M 378
           +
Sbjct: 372 L 372