Pairwise Alignments

Query, 389 a.a., D-alanyl-D-alanine carboxypeptidase from Vibrio cholerae E7946 ATCC 55056

Subject, 390 a.a., Serine-type D-Ala-D-Ala carboxypeptidase (RefSeq) from Shewanella loihica PV-4

 Score =  420 bits (1080), Expect = e-122
 Identities = 204/387 (52%), Positives = 283/387 (73%), Gaps = 4/387 (1%)

Query: 7   LVRFSMACMAFVPTLGFSALT----VVPEPPQLAANGYVLIDFHTGKVLVEHNAHQKLNP 62
           L+  S   +  V +L  +A      V P+ P++AA  ++L+D+++G+++ E NA++ LNP
Sbjct: 3   LLNHSFKTLLLVSSLSITAANAAPVVTPDAPKVAAKAFILMDYNSGQIIAEENAYESLNP 62

Query: 63  ASLTKLMTSYVAGQEMKRGNIHADDQVRISNNAWAKKFPDSSKMFIEVGTYVNLMDLYRG 122
           ASLTK+MTSYV G E+K GNI   D+V IS NAW+K FPDSSKMFIEVG  V++ +L RG
Sbjct: 63  ASLTKMMTSYVIGHEIKVGNISPQDKVTISKNAWSKNFPDSSKMFIEVGKQVSVEELNRG 122

Query: 123 LIVQSGNDASVAIAEHVAGSEGAFVSLMNSWAQQLGMNNSSFANPHGLDNPALYSTPYDI 182
           +I+QSGNDA VA+AEH+AG+E  FV LMNSWA+QLGM +S F N HGLD+    +T YD+
Sbjct: 123 IIIQSGNDACVAMAEHIAGTEDGFVDLMNSWAKQLGMRDSYFENSHGLDSENHKTTAYDM 182

Query: 183 ALLGRAIIRDLPEIYPLYSELSFTYNGITQHNRNGLLRDRSMNVDGMKTGYTSGAGYSLA 242
           ALLG A+IRD+PE Y +YSE SFTYNGI Q+NRNGLL D+S+NVDG+KTG+TSGAGY+L 
Sbjct: 183 ALLGAALIRDVPEEYRVYSEKSFTYNGIKQYNRNGLLWDKSLNVDGIKTGHTSGAGYNLV 242

Query: 243 SSATSGEMRLISVVMGSKSVKSREAESKQLLSYGFRFYETVTPHQKDTVIQNQRLWYGDK 302
           +SAT   MRL+SVV+G+ S  +R+AESK+LL+YGFRF+ET+TP++       Q++WYGD+
Sbjct: 243 TSATKDGMRLVSVVLGTASESARKAESKKLLNYGFRFFETITPYKAGDSFVTQKIWYGDR 302

Query: 303 NEVALGSADTVYLTLPRSDVKKLNAVIQLDQNLEAPIAKGDVVGSIFYYIDEEKVGEAKL 362
             V LG      +T+ R   K L A  +L++ L APIAKG+ VG I++ ++ + + +  L
Sbjct: 303 ESVDLGVLTDTPITISRGQAKNLEANYELNKELTAPIAKGETVGRIYFQLNGKDIAQFPL 362

Query: 363 VSQESVEQGGIFKRLMDWFKLLFSGWF 389
           V+ + V +G  F +LMD+FK +F+ WF
Sbjct: 363 VTLQEVNEGSWFSKLMDYFKQMFASWF 389