Pairwise Alignments

Query, 389 a.a., D-alanyl-D-alanine carboxypeptidase from Vibrio cholerae E7946 ATCC 55056

Subject, 441 a.a., D-alanyl-D-alanine carboxypeptidase family protein (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score =  149 bits (376), Expect = 2e-40
 Identities = 88/237 (37%), Positives = 137/237 (57%), Gaps = 4/237 (1%)

Query: 42  LIDFHTGKVLVEHNAHQKLNPASLTKLMTSYVAGQEMKRGNIHADDQVRISNNAWAKKFP 101
           LID ++ +VL E NA  ++ PASLTK+++ YVA   ++ G     D+V+IS  A      
Sbjct: 47  LIDQNSRRVLFEQNADAQIPPASLTKVISMYVALDHIRAGKASLADKVKISARAART--- 103

Query: 102 DSSKMFIEVGTYVNLMDLYRGLIVQSGNDASVAIAEHVAGSEGAFVSLMNSWAQQLGMNN 161
             S+MF+  G  V+L +L  G+ V SGNDASVA+AEH+AGS   FV LMN+ A+ LGM  
Sbjct: 104 GGSRMFLTRGETVSLDELLMGMAVSSGNDASVAVAEHIAGSTDRFVQLMNAKARALGMTE 163

Query: 162 SSFANPHGLDNPALYSTPYDIALLGRAIIRDLPEIYPLYSELSFTYNGITQHNRNGLLRD 221
           ++F N +GL      +T  D+  L  + +   P+    +S     +N +   N+N +L  
Sbjct: 164 TTFRNVNGLPAAGQKTTARDMGKLAVSYLTAHPQALRYHSTRFIRHNKVITTNKNPML-G 222

Query: 222 RSMNVDGMKTGYTSGAGYSLASSATSGEMRLISVVMGSKSVKSREAESKQLLSYGFR 278
                DG+KTG+   +GY+L S+   G  RL++VV+G+++ + R  E  +L+  G+R
Sbjct: 223 NCEGADGLKTGWVCASGYNLISTVKRGNTRLVAVVLGAENSQVRGQEMNRLIDAGYR 279