Pairwise Alignments

Query, 389 a.a., D-alanyl-D-alanine carboxypeptidase from Vibrio cholerae E7946 ATCC 55056

Subject, 391 a.a., penicillin-binding protein 6 (RefSeq) from Shewanella sp. ANA-3

 Score =  427 bits (1099), Expect = e-124
 Identities = 207/362 (57%), Positives = 275/362 (75%)

Query: 28  VVPEPPQLAANGYVLIDFHTGKVLVEHNAHQKLNPASLTKLMTSYVAGQEMKRGNIHADD 87
           V P+ P +AA  YVL+D+++G+++ E NA++ LNPASLTK+MTSYV GQE+K GN+  DD
Sbjct: 29  VTPDAPTVAAKAYVLMDYYSGQIIAEENAYESLNPASLTKMMTSYVIGQEIKAGNVSPDD 88

Query: 88  QVRISNNAWAKKFPDSSKMFIEVGTYVNLMDLYRGLIVQSGNDASVAIAEHVAGSEGAFV 147
            V IS NAW+K F DSSKMFIEVG  V + DL RG+I+QSGNDA VA+AEH+AG+EGAFV
Sbjct: 89  DVTISKNAWSKNFSDSSKMFIEVGKTVKVSDLNRGIIIQSGNDACVAMAEHIAGTEGAFV 148

Query: 148 SLMNSWAQQLGMNNSSFANPHGLDNPALYSTPYDIALLGRAIIRDLPEIYPLYSELSFTY 207
            +MNSWA+QLGM +S F N HGLD+    ST YD+ALLG A+IRD+PE Y +YSE  +T+
Sbjct: 149 DMMNSWAKQLGMRDSYFENSHGLDSENHKSTAYDMALLGAALIRDVPEEYRVYSEKYYTF 208

Query: 208 NGITQHNRNGLLRDRSMNVDGMKTGYTSGAGYSLASSATSGEMRLISVVMGSKSVKSREA 267
           NGI Q+NRNGLL D SMNVDG+KTG+TSGAGY+L +SAT   MRLISVVMG++S  +R+A
Sbjct: 209 NGIKQYNRNGLLWDNSMNVDGIKTGHTSGAGYNLVASATKDGMRLISVVMGTQSEAARKA 268

Query: 268 ESKQLLSYGFRFYETVTPHQKDTVIQNQRLWYGDKNEVALGSADTVYLTLPRSDVKKLNA 327
           ESK+LL+YGFRF+ETVTP++       Q++WYGDK+ V LG A    +T+ R   K L A
Sbjct: 269 ESKKLLTYGFRFFETVTPYKAGDSFVTQQIWYGDKSTVDLGVATDTPITISRGRAKDLKA 328

Query: 328 VIQLDQNLEAPIAKGDVVGSIFYYIDEEKVGEAKLVSQESVEQGGIFKRLMDWFKLLFSG 387
             +L + L+AP+ KG+ VG +++ +D + + +  LV+ + V +G  F +L+D+FK LFSG
Sbjct: 329 NFELTKPLDAPLKKGETVGRLYFQLDGKDIAQFPLVTLQEVNEGSWFSKLVDYFKQLFSG 388

Query: 388 WF 389
           WF
Sbjct: 389 WF 390