Pairwise Alignments

Query, 643 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 559 a.a., Methyl-accepting chemotaxis protein I (serine chemoreceptor protein) from Pseudomonas fluorescens FW300-N2E2

 Score =  252 bits (643), Expect = 4e-71
 Identities = 140/347 (40%), Positives = 217/347 (62%), Gaps = 1/347 (0%)

Query: 296 IVLIGISVGVIIFIINQIYKPLLRLKVAVLDLAQGSGDLTRRLEVNGNDDLAQISEGFNR 355
           +VL+ I+V V + + N I +PL  +K  + D+A G GDLTRRL +   D+L Q++  FNR
Sbjct: 214 VVLLVIAV-VGLLLANAILRPLHLMKDNLDDIAAGEGDLTRRLTITSQDELGQLAGSFNR 272

Query: 356 FSGNLQNMMLQISDATQIISSSIEQLSQTAKENEQMLISHSSETDQVVTAITQMSESART 415
           F   +  ++ QI+D T  ++  + Q+S+ A+ +EQ +     ETDQV TAI +MS +A+ 
Sbjct: 273 FVDKIHGLVRQITDMTSQLTGLVTQVSEQAQRSEQAMERQRHETDQVATAINEMSSAAQE 332

Query: 416 VAESVTQSNQITEAASKEAQQSLVIVNNAVSTVTSLVNDVENMSESISNMNRDANKISEV 475
           VA S   +    +   +E Q +  +V  ++  + +LVND+ +   S+ ++ +D   I  V
Sbjct: 333 VARSAQGAAVAAQQTDEEGQSAKRVVAGSIQQIHALVNDIRSSGVSLDSLQQDVASIVSV 392

Query: 476 LSVIGAISEQTNLLALNAAIEAARAGEQGRGFAVVADEVRALAARTQNSTTEISDMLTKL 535
           L VI +I+EQTNLLALNAAIEAARAGE GRGFAVVADEVRALA+RTQ ST EI  M+ +L
Sbjct: 393 LGVIRSIAEQTNLLALNAAIEAARAGEAGRGFAVVADEVRALASRTQQSTQEIQGMIDRL 452

Query: 536 LEGTDSVVGAMERTKQQCQTTADKTSEVSGSLNMMSASVSDIDDLSTQIAAATEQQSTVA 595
             GT + V AM R+ +    T+++ +E   SL+ M+  +  I+ ++ QIA+A E+Q+ VA
Sbjct: 453 QSGTHAAVEAMRRSSEAGDGTSERANEAGASLDTMAQLIGTINSMNAQIASAAEEQTAVA 512

Query: 596 AELSRNMLSIREIVESLVVSGRQTVGATESLSHSNHELEQLVGKFKL 642
            E++R++  I   V+S+    +     + SL+     L +LVG+F++
Sbjct: 513 EEINRSVHQIAVAVDSVADETQLGAQTSRSLADLGQRLGKLVGQFRI 559