Pairwise Alignments

Query, 643 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 629 a.a., Chemotactic transducer from Pseudomonas fluorescens FW300-N2E2

 Score =  242 bits (617), Expect = 4e-68
 Identities = 170/629 (27%), Positives = 300/629 (47%), Gaps = 23/629 (3%)

Query: 20  VVILVTISLMVLGTINMLSLKREMIDSLTTETQNKLNYHVSELEFWVKSRYEAVSRGANL 79
           +V+ V +S  +       +  RE +      T   L    + L+ W+  R   +   A  
Sbjct: 18  IVMAVFLSFSLFNDHRQQASTREALHRNLQATGQLLG---ANLDSWLAGRILLIEGAAET 74

Query: 80  FTPELSDTDNLNKVRLLAEAAQITNVIAAY---EDGRSYMSMDKEGGVTTNRFKFTDRDW 136
                +D        +L++       IA+Y   ED R ++  ++   V  + +    R W
Sbjct: 75  IA---ADPTPQTIGAILSQDIITKTFIASYVGLEDSRFFIHPER---VMPDGYDVRQRAW 128

Query: 137 YQQAKSRRSPFLTEIYQDQVTGKKVISAVSPILHQGQFVGALLGDFQLDDIITQVSNMRF 196
           Y+ A     P LTE Y        +++  +PI   G+ VG L     L+ +   ++ +  
Sbjct: 129 YKDAARSLEPVLTEPYIGAGIDYLIMTQAAPIKVDGKAVGVLGASLSLEQLAKIINAVDL 188

Query: 197 AG-GAATLTDKNAVFFASDDPNDIGRTPSQVSPSFREM--EAGFHRQESGHLSFPYLGIE 253
            G G A L   +       D   + +T +Q  P        A    QE+G          
Sbjct: 189 NGIGYAFLVSDDGKILVHPDNTRVTKTLAQAFPEGPPSINSALNEVQENGRTRIVT---- 244

Query: 254 FDGYYKRVNLTDDMYWTLMVFVDKATALADVDVAVANAITTGIVLIGISVGVIIFIINQI 313
               +  +N    ++W++ + VDK  A A +    A+A+   ++ + ++VG++  +IN +
Sbjct: 245 ----FTPINGLPSLHWSIGLSVDKDKAYAVLHAFRASALVATLIAMLVTVGLLGLLINAL 300

Query: 314 YKPLLRLKVAVLDLAQGSGDLTRRLEVNGNDDLAQISEGFNRFSGNLQNMMLQISDATQI 373
            +PL  +  A+  +A G GDLT+RL     D+   ++ GFNRF   +Q  + ++  ++  
Sbjct: 301 MRPLRSMGSAMQSIADGEGDLTQRLHSLSRDEFGMMAGGFNRFVERIQQSIREVLASSVQ 360

Query: 374 ISSSIEQLSQTAKENEQMLISHSSETDQVVTAITQMSESARTVAESVTQSNQITEAASKE 433
           ++    Q+SQ +  + +   + ++ T  V TAI ++  +A+ +A S   ++        +
Sbjct: 361 LTQLAAQVSQASNASLKSSDTQAALTHNVATAINELGAAAQEIARSAAHASSRASDTRDQ 420

Query: 434 AQQSLVIVNNAVSTVTSLVNDVENMSESISNMNRDANKISEVLSVIGAISEQTNLLALNA 493
            Q+   +V  ++S ++ L + V N  + I ++N    KI  +L VI  IS+QTNLLALNA
Sbjct: 421 TQEGQSVVQRSISAMSQLSSQVVNTRQDIESLNEKTLKIGRILDVIKGISDQTNLLALNA 480

Query: 494 AIEAARAGEQGRGFAVVADEVRALAARTQNSTTEISDMLTKLLEGTDSVVGAMERTKQQC 553
           AIEAARAG+ GRGFAVV+DEVR LA RTQ S  EI  M+ +L  G  S V AM  +++  
Sbjct: 481 AIEAARAGDAGRGFAVVSDEVRTLAHRTQQSAQEIHSMIEELQAGAGSAVSAMLESQRHS 540

Query: 554 QTTADKTSEVSGSLNMMSASVSDIDDLSTQIAAATEQQSTVAAELSRNMLSIREIVESLV 613
                        LN +   + +ID+++  +A ATE+Q++V   L R++  I ++ + +V
Sbjct: 541 DDNVTTARLAGERLNRVLMGIGEIDEINLSVATATEEQTSVVDNLDRDISHINDLNQEMV 600

Query: 614 VSGRQTVGATESLSHSNHELEQLVGKFKL 642
            + + T+ A   L + +  L+Q+V  FK+
Sbjct: 601 GNLQSTLQACTELENQSRRLQQMVNTFKI 629