Pairwise Alignments

Query, 643 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 626 a.a., Chemotactic transducer from Pseudomonas fluorescens FW300-N2E2

 Score =  240 bits (613), Expect = 1e-67
 Identities = 169/641 (26%), Positives = 302/641 (47%), Gaps = 21/641 (3%)

Query: 8   MTLGFKGRIYASVVILVTISLMVLGTINMLSLKREMIDSLTTETQNKLNYHVSELEFWVK 67
           M L F  +I  +   +V ++  +    N    +  +  SL +  +   +   S ++ W+ 
Sbjct: 1   MNLKFSHKILLAASGVVVLAFALFTLYNDYLQRNTIGSSLESSIEQSGDLTASSIQNWMS 60

Query: 68  SRYEAVSRGANLFTPELSDTDNLNKVRLLAEAAQITNVIAAYEDGRSYMSMDKEGGVTTN 127
            R   +   A     + +  D      L+ + A  +N    Y    + +   +      +
Sbjct: 61  GRILVLENLAQNIAHQGTAADLPG---LVDQPALTSNFQFTYVGQANGVFTQRPDAKMPD 117

Query: 128 RFKFTDRDWYQQAKSRRSPFLTEIYQDQVTGKKVISAVSPILHQGQFVGALLGDFQLDDI 187
            +    R WY+QA +     LT  Y   V G  V++   P+ H G+ +G + GD  L+ +
Sbjct: 118 GYDPRQRPWYKQAVTADKTMLTPPYLAAVGGL-VVTVALPVKHNGELLGVVGGDLSLETL 176

Query: 188 ITQVSNMRFAG-GAATLTDKNAVFFASDDPNDIGRTPSQVSPSFREMEAGFHRQESGHLS 246
           +  ++++ F G G A L   +     S D + + +    + P    +  G   Q+     
Sbjct: 177 VKIINSVDFGGIGHAFLVSGDGQVIVSPDKDQVMKNLKDIYPG-TPVRIGKGIQD----- 230

Query: 247 FPYLGIEFDGYYKRVNLTD-----DMYWTLMVFVDKATALADVDVAVANAITTGIVLIGI 301
                +E +G  + ++ T      +  W + + +DKA A A +     +A+    V +  
Sbjct: 231 -----VELNGQDRILSFTPVTGLPNAEWYIGLSIDKAKAYAPLSQFRTSALIAMFVAVAA 285

Query: 302 SVGVIIFIINQIYKPLLRLKVAVLDLAQGSGDLTRRLEVNGNDDLAQISEGFNRFSGNLQ 361
              ++  +I  + +PL  +  A+ D+AQG GDLTRRL V G D+ A +   FN+F   + 
Sbjct: 286 IALLLSLLIQVLMRPLTTMGRAMQDIAQGEGDLTRRLVVQGKDEFAVLGGSFNQFVERIH 345

Query: 362 NMMLQISDATQIISSSIEQLSQTAKENEQMLISHSSETDQVVTAITQMSESARTVAESVT 421
             + ++S AT+ +    +++  ++  +       S+ T+ V  AI Q+  + + +A +  
Sbjct: 346 ASISEVSSATRQVHDLSQRVMTSSNASLVGSDEQSARTNSVAAAINQLGAATQEIARNAA 405

Query: 422 QSNQITEAASKEAQQSLVIVNNAVSTVTSLVNDVENMSESISNMNRDANKISEVLSVIGA 481
            ++Q    AS++A     +V   +  +T L   +      I  +N   + I  +L VI  
Sbjct: 406 DASQHASGASEQADDGRQVVEKTIQAMTELSQKISLSCTQIETLNASTDNIGHILDVIKG 465

Query: 482 ISEQTNLLALNAAIEAARAGEQGRGFAVVADEVRALAARTQNSTTEISDMLTKLLEGTDS 541
           IS+QTNLLALNAAIEAARAGE GRGFAVVADEVR LA RTQ S  EI  M+T L  G+  
Sbjct: 466 ISQQTNLLALNAAIEAARAGEAGRGFAVVADEVRNLAHRTQESAEEIHKMITSLQVGSRE 525

Query: 542 VVGAMERTKQQCQTTADKTSEVSGSLNMMSASVSDIDDLSTQIAAATEQQSTVAAELSRN 601
            V  M  ++   + + +  ++    L  ++  + +ID ++  +AAATE+Q+ V   L+ +
Sbjct: 526 AVTTMNASQTSSEESVEVANQAGLRLVSVTQRIGEIDGMNQSVAAATEEQTAVVETLNMD 585

Query: 602 MLSIREIVESLVVSGRQTVGATESLSHSNHELEQLVGKFKL 642
           +  I  + +  V +  +T+   ++LS   + L+QLV  FK+
Sbjct: 586 VSHINLLNQQSVANLNETLKDCDALSQQANRLKQLVDSFKI 626