Pairwise Alignments

Query, 643 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 626 a.a., Methyl-accepting chemotaxis protein from Pseudomonas fluorescens FW300-N2E2

 Score =  252 bits (644), Expect = 3e-71
 Identities = 168/640 (26%), Positives = 307/640 (47%), Gaps = 25/640 (3%)

Query: 12  FKGRIYASVVILVTISLMVLGTINMLSLKREMIDSLTTETQNKLNYHVSELEFWVKSRYE 71
           F  +I  +  ++V ++       N    ++ +  S  T  Q   +     ++ WV  R +
Sbjct: 3   FSHKILLAAALVVAVAFACFILFNDYRQRQSLNASTETSMQELGSLTSRNIQTWVDGRIQ 62

Query: 72  AVSRGANLFTPELSDTDNLNKVRLLAEAAQITNVIAAYEDGRSYMSMDKEGGVTTNRFKF 131
            +   A     + S  D+L   R +   A  +N   +Y  G   +      G     +  
Sbjct: 63  LLQSLAQQIAADGSSADSLK--RAVGLPAYTSNFQLSYFGGTDGVMFSVPAGNRAADYDP 120

Query: 132 TDRDWYQQAKSRRSPFLTEIYQDQVTGKKVISAVSPILHQGQFVGALLGDFQLDDIITQV 191
             R WY+ A S +   +TE Y    +GK VI+  +P+ HQ Q +G    D  L  +   +
Sbjct: 121 RARGWYKAANSAQQTIVTEPYIAASSGKLVITVATPVQHQNQMIGVAGADIDLSSVSAII 180

Query: 192 SNMRFAG-GAATLTDKNAVFFASDDPNDIGRTPS--------QVSPSFREMEAGFHRQES 242
           +++ F G G A +   +       D   + +T +        Q+SP  +E++     Q  
Sbjct: 181 NSLNFGGHGHAFIVSADGKILIHPDSKRVLKTLAEAYPNGAPQISPGVKEVDLDGKTQ-- 238

Query: 243 GHLSFPYLGIEFDGYYKRVNLTDDMYWTLMVFVDKATALADVDVAVANAITTGIVLIGIS 302
             +SF +           VN      W + + +DK TALA +     +A+   ++ +   
Sbjct: 239 -FISFTH-----------VNGVPGADWYVALVLDKDTALAMLSEFRTSALIAMVIAVVFI 286

Query: 303 VGVIIFIINQIYKPLLRLKVAVLDLAQGSGDLTRRLEVNGNDDLAQISEGFNRFSGNLQN 362
           + ++  +I  + +PLL +  A+ D+A+G GDLTRRL ++G+D+   +   FNRF   +  
Sbjct: 287 IALLGMLIRVLMQPLLTMGRAMHDIAEGEGDLTRRLVIHGHDEFGALGTSFNRFVERIHT 346

Query: 363 MMLQISDATQIISSSIEQLSQTAKENEQMLISHSSETDQVVTAITQMSESARTVAESVTQ 422
            + +++ AT  ++    ++   +  +       +S T  V  AI Q+  +A+ +A++   
Sbjct: 347 SIREVASATGQVNEVALRVVSASNSSMFNSDQQASRTSSVAAAINQLGAAAQEIAQNAAL 406

Query: 423 SNQITEAASKEAQQSLVIVNNAVSTVTSLVNDVENMSESISNMNRDANKISEVLSVIGAI 482
           ++Q +  A   A+    +V+  ++ +  L   + +   +I  +N +   I ++L VI +I
Sbjct: 407 ASQHSSDARSLAEDGQQVVDKTIAAMQQLSAKISDSCGNIETLNSNTVNIGQILEVITSI 466

Query: 483 SEQTNLLALNAAIEAARAGEQGRGFAVVADEVRALAARTQNSTTEISDMLTKLLEGTDSV 542
           S+QTNLLALNAAIEAARAGE GRGFAVVADEVR LA RTQ+S  ++  M+ +L  G    
Sbjct: 467 SQQTNLLALNAAIEAARAGEAGRGFAVVADEVRNLAHRTQDSAQQVQKMIEELQVGAREA 526

Query: 543 VGAMERTKQQCQTTADKTSEVSGSLNMMSASVSDIDDLSTQIAAATEQQSTVAAELSRNM 602
           V  M  +++Q +++    ++    L  ++  + +ID ++  +A ATE+Q+ V   ++ ++
Sbjct: 527 VLTMTDSQRQSESSVGIANQAGERLGSVTQRIGEIDGMNQSVATATEEQTAVVESINVDI 586

Query: 603 LSIREIVESLVVSGRQTVGATESLSHSNHELEQLVGKFKL 642
             I  + +  V + + T+ A   L      L+QLVG F++
Sbjct: 587 TEINTLNQEGVENLQATLRACADLEQQAARLKQLVGSFRI 626