Pairwise Alignments

Query, 643 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 493 a.a., Methyl-accepting chemotaxis protein I (serine chemoreceptor protein) from Pseudomonas fluorescens FW300-N2E2

 Score =  199 bits (506), Expect = 2e-55
 Identities = 123/344 (35%), Positives = 200/344 (58%), Gaps = 12/344 (3%)

Query: 296 IVLIGISVGVIIFIINQIYKPLLRLKVAVLDLAQGSGDLTRRLEVNGNDDLAQISEGFNR 355
           + ++G S  +I F+++Q    L  LK  +L + + +GDL+ R+ +   D++ Q++  FN 
Sbjct: 152 LAMLGASQLLIRFLLSQ----LNTLKDVMLHVEK-TGDLSARVPLACEDEVGQMAAAFNA 206

Query: 356 FSGNLQNMMLQISDATQIISSSIEQLSQTAKENEQMLISHSSETDQVVTAITQMSESART 415
                Q ++  ++   + + S   +L+ +  +    ++   SETDQ  TAI +MS +   
Sbjct: 207 MQAGYQRVVDTVASTARQLDSGAARLASSMNDVRHGMLGQQSETDQAATAINEMSATVYH 266

Query: 416 VAESVTQSNQITEAASKEAQQSLVIVNNAVSTVTSLVNDVENMSESISNMNRDANKISEV 475
           +A+    +  +++ A   A     +V     ++T L + V+  +E I  +  D+ KI+ V
Sbjct: 267 IAQHAGATRDLSKTADTLAGNGHDVVARVQQSITGLSSGVQQTAEMIQRLAEDSQKINGV 326

Query: 476 LSVIGAISEQTNLLALNAAIEAARAGEQGRGFAVVADEVRALAARTQNSTTEISDMLTKL 535
           +SVI +I+EQTNLLALNAAIEAARAGE GRGFAVVADEVR LA R Q ST EI+ M++ L
Sbjct: 327 VSVIHSIAEQTNLLALNAAIEAARAGEMGRGFAVVADEVRNLAKRVQTSTDEITTMVSAL 386

Query: 536 LEGTDSVVGAMERTKQQCQTTADKTSEVSGSLNMMSASVSDIDDLSTQIAAATEQQSTVA 595
             GT   V  M+ +  +      +  E   +L  ++A+V+ + + +TQIA A EQQS VA
Sbjct: 387 QAGTRDAVDFMQESSLKADDCVQQAREAGDALAQITAAVAQMRESNTQIAVAAEQQSHVA 446

Query: 596 AELSRNMLSIREIVESLVVSGRQTVGATESLSHSNHELEQLVGK 639
            E++R ++SIR++ E+ V   RQTV +    + ++HEL  L G+
Sbjct: 447 EEMNRAVVSIRDVTENTV---RQTVDS----ATTSHELATLAGE 483