Pairwise Alignments

Query, 643 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 629 a.a., Methyl-accepting chemotaxis protein from Pseudomonas stutzeri RCH2

 Score =  245 bits (626), Expect = 4e-69
 Identities = 174/637 (27%), Positives = 302/637 (47%), Gaps = 34/637 (5%)

Query: 22  ILVTISLMVLGTINMLSLKREMI------DSLTTETQNKLNYHVSELEFWVKSRYEAVSR 75
           IL+  SL+V+ T ++ +L  + +      D+L +      +     ++ W+  R   V  
Sbjct: 11  ILLAASLIVIATFSLFTLFNDYLQRNAIRDNLNSYLDEMGDVTAHNIQNWLSGRILLVES 70

Query: 76  GANLFTPELSDTDNLNKVRLLAEAAQITNVIAAYEDGRSYMSMDKEGGVTTNRFKFTDRD 135
            A       SD        LL + A  +  + +Y  G+    + +        +    R 
Sbjct: 71  AAQSIG---SDDAEARVAELLEQKALASTFMFSYLGGQDGSFLMRPAEEMPADYDPRARP 127

Query: 136 WYQQAKSRRSPFLTEIYQDQVTGKKVISAVSPILHQGQFVGALLGDFQLDDIITQVSNMR 195
           WY+ A +     LTE Y D  +G+ VIS  +P    G+ +G + GD  L  ++  ++ + 
Sbjct: 128 WYKDAIAAGGSTLTEPYVDAASGELVISIATPAQQNGRNIGVVGGDLGLKVLVEIINALD 187

Query: 196 FAG-GAATLTDKNAVFFASDDPNDIGRTPSQVSPSFREMEAGFHRQESGHLSFPYLGIEF 254
           F G G A L   +       D + + ++  ++ P             +  L   Y   E 
Sbjct: 188 FNGMGHAFLVSGDGKILVHPDGSKVMKSLGELFPG-----------HTPSLDANYSEAEL 236

Query: 255 DGY-----YKRVNLTDDMYWTLMVFVDKATALADVDVAVANAITTGIVLIGISVGVIIFI 309
           DG      + RV     + W + + +DKA A A    A+A+  T+ +V    +VGVI+ +
Sbjct: 237 DGQTRILSFSRVQGLPSVSWYVGISLDKAKAYA----ALASFRTSAVVAALTAVGVILLL 292

Query: 310 INQIYKPLLR----LKVAVLDLAQGSGDLTRRLEVNGNDDLAQISEGFNRFSGNLQNMML 365
           +  + + L+R    +  A+ ++A+G GDLTRRL V   D+  +++  FNRF   +   + 
Sbjct: 293 LGMLMRVLMRPLTDMGRAMANIAEGEGDLTRRLAVQSKDEFGELASAFNRFVERIHTSIR 352

Query: 366 QISDATQIISSSIEQLSQTAKENEQMLISHSSETDQVVTAITQMSESARTVAESVTQSNQ 425
           ++S ATQ ++    ++   +  +       +S T+ V  AI ++  +A+ +A +   ++Q
Sbjct: 353 EVSSATQQVNEVAARVLAASNSSMANSDEQASRTNSVAAAINELGAAAQEIARNAADASQ 412

Query: 426 ITEAASKEAQQSLVIVNNAVSTVTSLVNDVENMSESISNMNRDANKISEVLSVIGAISEQ 485
               A  +A+    +V   ++ +  L   +      I  +N     I ++L VI  ISEQ
Sbjct: 413 QASGARHQAEDGRQVVEQNIAAMRELSAKISASCAQIEALNAKTVDIGQILEVIKGISEQ 472

Query: 486 TNLLALNAAIEAARAGEQGRGFAVVADEVRALAARTQNSTTEISDMLTKLLEGTDSVVGA 545
           TNLLALNAAIEAARAGE GRGFAVVADEVR LA RTQ+S  EI  M+ +L  G  + V  
Sbjct: 473 TNLLALNAAIEAARAGEAGRGFAVVADEVRNLAHRTQSSAQEIQQMIEQLQVGAGASVQT 532

Query: 546 MERTKQQCQTTADKTSEVSGSLNMMSASVSDIDDLSTQIAAATEQQSTVAAELSRNMLSI 605
           M  +++Q +++          L  ++  + +ID ++  +A ATE+Q+ V   L+ ++  I
Sbjct: 533 MTESQRQSESSVSIADRAGERLGEVTQRIGEIDGMNQSVATATEEQTAVIESLNMDITEI 592

Query: 606 REIVESLVVSGRQTVGATESLSHSNHELEQLVGKFKL 642
             + +  V + + T+ A   L      L+QLV  F++
Sbjct: 593 NTLNQQGVENLQSTLRACGDLDQQARRLKQLVDSFRI 629