Pairwise Alignments

Query, 643 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 709 a.a., Methyl-accepting chemotaxis protein from Pseudomonas stutzeri RCH2

 Score =  235 bits (599), Expect = 6e-66
 Identities = 150/501 (29%), Positives = 271/501 (54%), Gaps = 32/501 (6%)

Query: 166 SPILHQGQFVGALLGDFQLDDI--ITQVSNMRFAGGA---ATLTDKNAVFFASDDPNDIG 220
           +PI+  G+F G +  D  +D +  +   +N +  GGA   A +++   +   S D N +G
Sbjct: 217 APIIIDGKFHGIVGADIGVDFMQQLLSSANSQLYGGAGQIALISNNGRLAAYSRDRNLLG 276

Query: 221 RTPSQVSPS-----FREMEAGFHRQESGHLSFP---YLGIEFDGYYKRVNLTDDMYWTLM 272
           +  +Q+  +      +++ AG       H       +L   F G         D  W LM
Sbjct: 277 KPAAQLLDADEQALVKQLPAGQTHYRIDHARGRVALFLPFSFPG--------TDARWVLM 328

Query: 273 VFVDKATALADVDVAV-----------ANAITTGIVLIGISVGVIIFIINQIYKPLLRLK 321
           + +  A  + ++D  +           A  +  G+++    +  I  I  +I +PL  + 
Sbjct: 329 LELPTAEVMKELDQLMVALGEESRSNLAAMLVIGMLIAFAGLLAIWLISRRITRPLRDMV 388

Query: 322 VAVLDLAQGSGDLTRRLEVNGNDDLAQISEGFNRFSGNLQNMMLQISDATQIISSSIEQL 381
           V + +++QG GDLT+RL ++  ++L QI+ GFN F   LQ M+ ++  + Q +S + E  
Sbjct: 389 VMLDNISQGEGDLTQRLNIDSRNELGQIAAGFNAFLARLQGMISEVVSSVQKVSDASEHT 448

Query: 382 SQTAKENEQMLISHSSETDQVVTAITQMSESARTVAESVTQSNQITEAASKEAQQSLVIV 441
           +  A   ++ + +  +E + V TA+ +M+ +A+ VA + TQ+ +    A + A Q   IV
Sbjct: 449 ADIAIRTDKGVQTQLAEIELVATAVHEMTATAQDVARNATQAAEAANNADRAANQGRHIV 508

Query: 442 NNAVSTVTSLVNDVENMSESISNMNRDANKISEVLSVIGAISEQTNLLALNAAIEAARAG 501
            +  +T+  L +++    + +  + RD+  I  +L  I +I+EQTNLLALNAAIEAARAG
Sbjct: 509 QDTGATIAELASEIGRAVDVVQTLARDSENIDAILVTIRSIAEQTNLLALNAAIEAARAG 568

Query: 502 EQGRGFAVVADEVRALAARTQNSTTEISDMLTKLLEGTDSVVGAMERTKQQCQTTADKTS 561
           EQGRGFAVVADEVR LA +TQ +T EI  M+ +L  GT  VV  ME+++ + + + ++  
Sbjct: 569 EQGRGFAVVADEVRNLAQKTQQATGEIQQMIQQLQGGTRDVVQVMEQSQNRTRRSVEQAD 628

Query: 562 EVSGSLNMMSASVSDIDDLSTQIAAATEQQSTVAAELSRNMLSIREIVESLVVSGRQTVG 621
             + +L  ++ +VS I+D++ QIA+A E+QS VA +++RN+ +I ++ + +     +   
Sbjct: 629 AAAEALQAITQAVSLINDMNNQIASAAEEQSAVAEDINRNVTNIGQVAQQVAAGADEASQ 688

Query: 622 ATESLSHSNHELEQLVGKFKL 642
           A+  L+    +  +L+ +F++
Sbjct: 689 ASAGLTRLAEQQRRLINQFRV 709