Pairwise Alignments

Query, 643 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 640 a.a., Histidine kinase, HAMP region:Bacterial chemotaxis sensory transducer from Pseudomonas syringae pv. syringae B728a

 Score =  223 bits (569), Expect = 2e-62
 Identities = 131/360 (36%), Positives = 210/360 (58%), Gaps = 4/360 (1%)

Query: 285 DVAVANAITTGIVLIGISVGVI--IFIINQIYKPLLRLKVAVLDLAQGSGDLTRRLEVNG 342
           D A A ++  G V++ + +G++  + I  QI +PL      V  +A  SGDLT    V  
Sbjct: 283 DTAHARSLQIGCVVLVMLLGILAAVIITRQITRPLRDTLAIVERIA--SGDLTHTEAVTR 340

Query: 343 NDDLAQISEGFNRFSGNLQNMMLQISDATQIISSSIEQLSQTAKENEQMLISHSSETDQV 402
            D+L  + +G  R    L+ ++  I D    I+S+ E+LS   ++    + S   ETDQV
Sbjct: 341 RDELGVLQQGIQRMGTTLRELISGIRDGVTQIASAAEELSAVTEQTSAGVNSQKVETDQV 400

Query: 403 VTAITQMSESARTVAESVTQSNQITEAASKEAQQSLVIVNNAVSTVTSLVNDVENMSESI 462
            TA+ +MS +   VA +  Q++     A ++A+    +V  A+  +  L  +V   S+++
Sbjct: 401 ATAMHEMSATVHEVARNAEQASVAASDADQQARDGDKVVGEAIQQIERLAAEVVRSSDAM 460

Query: 463 SNMNRDANKISEVLSVIGAISEQTNLLALNAAIEAARAGEQGRGFAVVADEVRALAARTQ 522
           + + +D++KI +V+ VI A++EQTNLLALNAAIEAARAGE GRGFAVVADEVR LA RTQ
Sbjct: 461 NVLEQDSDKIGKVMDVIKAVAEQTNLLALNAAIEAARAGEAGRGFAVVADEVRGLAQRTQ 520

Query: 523 NSTTEISDMLTKLLEGTDSVVGAMERTKQQCQTTADKTSEVSGSLNMMSASVSDIDDLST 582
            ST EI  ++  L  GT  V G M  ++    ++ + T     SL  ++ +VS I  ++ 
Sbjct: 521 QSTEEIEGLVAALQNGTRQVSGIMLGSRTLTDSSVELTRRAGTSLESITRTVSSIQAMNQ 580

Query: 583 QIAAATEQQSTVAAELSRNMLSIREIVESLVVSGRQTVGATESLSHSNHELEQLVGKFKL 642
           QIAAA EQQS+VA E+SR+++++R++ E    +  +T  ++  L+    +L+ +V  F++
Sbjct: 581 QIAAAAEQQSSVADEISRSIVNVRDVSEQTAEASEETAASSVELARLGGQLQMMVSHFRV 640