Pairwise Alignments

Query, 643 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 681 a.a., Histidine kinase, HAMP region:Bacterial chemotaxis sensory transducer from Pseudomonas syringae pv. syringae B728a

 Score =  224 bits (570), Expect = 1e-62
 Identities = 125/364 (34%), Positives = 208/364 (57%), Gaps = 2/364 (0%)

Query: 279 TALADVDVAVANAITTGIVLIGISVGVIIFIINQIYKPLLRLKVAVLDLAQGSGDLTRRL 338
           +A  +   AV   ++  +V++ + +     I  QI  PL    +A   +A G  DLT   
Sbjct: 320 SAKKEQQTAVVQLLSVALVVLLVGIFAAFLITRQITVPLNSTVIAARRIADG--DLTHDS 377

Query: 339 EVNGNDDLAQISEGFNRFSGNLQNMMLQISDATQIISSSIEQLSQTAKENEQMLISHSSE 398
                D+L  +       + +L+ ++  I +    I+++ EQLS  +++    +    +E
Sbjct: 378 STTRQDELGLLQNTMQHMTVSLRGLIGGIGNGVTQIATAAEQLSAVSEQTSAGVTLQKNE 437

Query: 399 TDQVVTAITQMSESARTVAESVTQSNQITEAASKEAQQSLVIVNNAVSTVTSLVNDVENM 458
            DQV TA+ +M+ + + VA +   ++Q  + AS+ A     +V +A   +  L  +V+ +
Sbjct: 438 VDQVATAMNEMASTVQEVARNTEDASQAAKQASERAAHGSSVVQHATREIGQLAGEVQQL 497

Query: 459 SESISNMNRDANKISEVLSVIGAISEQTNLLALNAAIEAARAGEQGRGFAVVADEVRALA 518
            E++  +  D+ KI  V+ VI A++EQTNLLALNAAIEAARAGEQGRGFAVVADEVR+LA
Sbjct: 498 GEAMQRLTEDSGKIGSVIDVIKAVAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRSLA 557

Query: 519 ARTQNSTTEISDMLTKLLEGTDSVVGAMERTKQQCQTTADKTSEVSGSLNMMSASVSDID 578
            RTQNSTTEI  ++  L +GT +  G M+ + Q+ + T     +   +L  ++ S+  I+
Sbjct: 558 QRTQNSTTEIEALIQALQKGTGAASGLMDASLQRTEGTVVLARQAEQALVEINQSIGTIE 617

Query: 579 DLSTQIAAATEQQSTVAAELSRNMLSIREIVESLVVSGRQTVGATESLSHSNHELEQLVG 638
            +S QI+AA EQQS V  E++R++LS+R+I +    +  Q+  +T  L+    +L+ +V 
Sbjct: 618 QMSQQISAAAEQQSAVTEEINRSVLSVRDIADQSASATEQSAASTVELARLGSDLQSMVA 677

Query: 639 KFKL 642
           +FK+
Sbjct: 678 RFKI 681